About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides00208-
Paelopatides00209SI:CH211-196P9.1-RELATED
Paelopatides00210-
Paelopatides00211-
Paelopatides00212REVERSE TRANSCRIPTASES
Paelopatides00213ENDONUCLEASE-RELATED
Paelopatides00214REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides00215H/ACA RIBONUCLEOPROTEIN COMPLEX NON-CORE SUBUNIT NAF1
Paelopatides00216-
Paelopatides00217ENDONUCLEASE-RELATED
Paelopatides00218-
Paelopatides00219-
Paelopatides00220PROTEIN KINASE DOMAIN-CONTAINING PROTEIN
Paelopatides00221NETRIN RECEPTOR UNC5
Paelopatides00222REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides00223-
Paelopatides00224HISTAMINE RECEPTOR-RELATED G-PROTEIN COUPLED RECEPTOR
Paelopatides00225PHOSPHATIDYLINOSITOL-GLYCAN BIOSYNTHESIS CLASS F PROTEIN-RELATED
Paelopatides00226UNCHARACTERIZED
Paelopatides00227REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
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