The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Paelopatides sp. Yap | Echinodermata | Paelopatides sp. Yap | Deep sea | 6,633 | Yap Trench at 8°1′22"N; 137°50′41"E | - |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| - | 3.7Gb | Contig | 2020 | - | Fujian Agriculture and Forestry University | PRJCA003789 | 89.40% | 57,522 |
| Title | Journal | Pubmed ID |
|---|---|---|
| The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environments | iScience | 36444293 |
| Gene ID | Description |
|---|---|
| Paelopatides00518 | GALACTOSE-3-O-SULFOTRANSFERASE |
| Paelopatides00519 | PROTEIN CBG26694 |
| Paelopatides00520 | ENDONUCLEASE-RELATED |
| Paelopatides00521 | TRANSPOSABLE ELEMENT-RELATED |
| Paelopatides00522 | MULTICOPPER OXIDASE-RELATED |
| Paelopatides00523 | UNCHARACTERIZED |
| Paelopatides00524 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides00525 | AP COMPLEX SUBUNIT MU |
| Paelopatides00526 | PROTEIN CBG26694 |
| Paelopatides00527 | |
| Paelopatides00528 | AP COMPLEX SUBUNIT MU |
| Paelopatides00529 | ANK_REP_REGION DOMAIN-CONTAINING PROTEIN-RELATED |
| Paelopatides00530 | ATP-BINDING CASSETTE SUB-FAMILY C |
| Paelopatides00531 | |
| Paelopatides00532 | |
| Paelopatides00533 | ATP-BINDING CASSETTE SUB-FAMILY C |
| Paelopatides00534 | TRANSPOSON |
| Paelopatides00535 | ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides00536 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
| Paelopatides00537 | SOLUTE CARRIER FAMILY 2 |
| Paelopatides00538 | SOLUTE CARRIER FAMILY 2 |
| Paelopatides00539 | SI:CH211-262H13.3-RELATED-RELATED |
| Paelopatides00540 | CELL SURFACE GLYCOPROTEIN MUC18-RELATED |
| Paelopatides00541 | |
| Paelopatides00542 | FIBRINOGEN/TENASCIN/ANGIOPOEITIN |
| Paelopatides00543 | |
| Paelopatides00544 | |
| Paelopatides00545 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides00546 | RETROVIRUS-RELATED POL POLYPROTEIN FROM TRANSPOSON 412-LIKE PROTEIN-RELATED |
| Paelopatides00547 | |
| Paelopatides00548 | PROTEIN CBG26694 |
| Paelopatides00549 | MICROSOMAL GLUTATHIONE S-TRANSFERASE 1 |
| Paelopatides00550 | COPPER TRANSPORT PROTEIN ATOX1 |
| Paelopatides00551 | SMAD |
| Paelopatides00552 | SMAD |
| Paelopatides00553 | REVERSE TRANSCRIPTASES |
| Paelopatides00554 | POL PROTEIN |
| Paelopatides00555 | |
| Paelopatides00556 | YIPPEE DOMAIN-CONTAINING PROTEIN |
| Paelopatides00557 | 52 KDA REPRESSOR OF THE INHIBITOR OF THE PROTEIN KINASE-LIKE PROTEIN-RELATED |
| Paelopatides00558 | VERY KIND PROTEIN |
| Paelopatides00559 | VERY KIND PROTEIN |
| Paelopatides00560 | PUTATIVE TREBLE-CLEF ZINC-FINGER C2ORF42 FAMILY MEMBER |
| Paelopatides00561 | |
| Paelopatides00562 | FAS-ASSOCIATING DEATH DOMAIN-CONTAINING PROTEIN FADD |
| Paelopatides00563 | |
| Paelopatides00564 | ENDONUCLEASE-RELATED |
| Paelopatides00565 | POL PROTEIN |
| Paelopatides00566 | L1 TRANSPOSABLE ELEMENT-RELATED |
| Paelopatides00567 | SPHINGOSINE KINASE |
