About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40%57,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides00568REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides00569TBC1 DOMAIN FAMILY MEMBER GTPASE-ACTIVATING PROTEIN
Paelopatides00570TUBULIN
Paelopatides00571DDB1- AND CUL4-ASSOCIATED FACTOR 12-RELATED
Paelopatides00572NADH-UBIQUINONE OXIDOREDUCTASE 13 KD-B SUBUNIT
Paelopatides00573
Paelopatides00574UBIQUITIN CARBOXYL-TERMINAL HYDROLASE
Paelopatides00575
Paelopatides00576
Paelopatides00577GH10160P
Paelopatides00578
Paelopatides00579NACHT DOMAIN-CONTAINING PROTEIN
Paelopatides00580PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN
Paelopatides00581TOLL-LIKE RECEPTOR
Paelopatides00582DDE_TNP_1_7 DOMAIN-CONTAINING PROTEIN
Paelopatides00583RETROTRANSPOSON
Paelopatides00584PHD-TYPE DOMAIN-CONTAINING PROTEIN
Paelopatides00585PHD-TYPE DOMAIN-CONTAINING PROTEIN
Paelopatides00586
Paelopatides00587
Paelopatides00588
Paelopatides00589ZINC KNUCKLE DOMAINCONTAINING PROTEIN-RELATED
Paelopatides00590ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides00591L-ASPARAGINASE
Paelopatides00592DDE_TNP_IS1595 DOMAIN-CONTAINING PROTEIN
Paelopatides00593MICROSOMAL GLUTATHIONE S-TRANSFERASE 1
Paelopatides00594MICROSOMAL GLUTATHIONE S-TRANSFERASE 1
Paelopatides00595
Paelopatides00596RAS-ASSOCIATING DOMAIN-CONTAINING PROTEIN
Paelopatides00597NETRIN RECEPTOR UNC5
Paelopatides00598
Paelopatides00599GOLGIN
Paelopatides00600
Paelopatides00601LD21662P
Paelopatides00602
Paelopatides00603EPPIN
Paelopatides00604PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN
Paelopatides00605PROTEIN CBG26694
Paelopatides00606CXC DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides00607CXC DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides00608CXC DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides00610REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides00611
Paelopatides00612
Paelopatides00613PEPTIDASE
Paelopatides00614
Paelopatides00615EXPRESSED PROTEIN
Paelopatides00616TYROSINE-PROTEIN KINASE
Paelopatides00617
Paelopatides00618CELL SURFACE GLYCOPROTEIN MUC18-RELATED
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