About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides00289ENDONUCLEASE-RELATED
Paelopatides00290-
Paelopatides00291PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4
Paelopatides00292ATP-DEPENDENT RNA HELICASE DBP3
Paelopatides00293STEROL ISOMERASE
Paelopatides00294RAS, DI-RAS, AND RHEB FAMILY MEMBERS OF SMALL GTPASE SUPERFAMILY
Paelopatides00295PHOSPHOLIPASE A-2-ACTIVATING PROTEIN
Paelopatides00296-
Paelopatides00297-
Paelopatides00298FI04643P-RELATED
Paelopatides00299PHENYLALANYL-TRNA SYNTHETASE
Paelopatides00300BARDET-BIEDL SYNDROME 10 PROTEIN
Paelopatides00301-
Paelopatides00302PROTEIN CBG26694
Paelopatides00303REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides00304-
Paelopatides00305PROTEIN CBG26694
Paelopatides00306MONOCARBOXYLATE TRANSPORTER
Paelopatides00307TYROSINE SPECIFIC PROTEIN PHOSPHATASE AND DUAL SPECIFICITY PROTEIN PHOSPHATASE
Paelopatides00308-
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