About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides00333ZGC:195170
Paelopatides00334FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides00335NOVEL ZZ TYPE ZINC FINGER DOMAIN CONTAINING PROTEIN
Paelopatides00336-
Paelopatides00337-
Paelopatides00338PTB-CONTAINING, CUBILIN AND LRP1-INTERACTING PROTEIN
Paelopatides00340FER-1-LIKE
Paelopatides00341PLACENTAL PROTEIN 11-RELATED
Paelopatides00342-
Paelopatides00343MUCIN-17
Paelopatides00344ATAXIA TELANGIECTASIA MUTATED ATM -RELATED
Paelopatides00345ATAXIA TELANGIECTASIA MUTATED ATM -RELATED
Paelopatides00346POLYCOMB GROUP PROTEIN
Paelopatides00347CYSTINOSIN
Paelopatides00348CARBON CATABOLITE REPRESSOR PROTEIN 4
Paelopatides00349INNER MEMBRANE TRANSPORTER YGJI-RELATED
Paelopatides00350INNER MEMBRANE TRANSPORTER YGJI-RELATED
Paelopatides00351-
Paelopatides00352FAS-ASSOCIATING DEATH DOMAIN-CONTAINING PROTEIN FADD
Paelopatides00353TRANSCRIPTASE, PUTATIVE-RELATED-RELATED
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