About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides00375IP13529P
Paelopatides00376REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides00377EARLY GAMETOCYTE ENRICHED PHOSPHOPROTEIN EGXP
Paelopatides00378LD44762P
Paelopatides0037940S RIBOSOMAL PROTEIN S30/UBIQUITIN-LIKE PROTEIN FUBI
Paelopatides00380REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides00381-
Paelopatides00382SPECTRIN/FILAMIN RELATED CYTOSKELETAL PROTEIN
Paelopatides00383ACYL-COA DEHYDROGENASE
Paelopatides00384REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides00385VOLTAGE-DEPENDENT CALCIUM CHANNEL SUBUNIT ALPHA-2/DELTA-RELATED
Paelopatides00386BONUS, ISOFORM C-RELATED
Paelopatides00387-
Paelopatides00388-
Paelopatides00389CXC DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides00390ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides00391PROTEIN CBG26694
Paelopatides00392EPM2A-INTERACTING PROTEIN 1
Paelopatides00393BUCENTAUR RELATED
Paelopatides00394REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
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