About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides00437-
Paelopatides00438CANCER-RELATED NUCLEOSIDE-TRIPHOSPHATASE
Paelopatides00439SERINE/THREONINE-PROTEIN PHOSPHATASE 5-RELATED
Paelopatides00440CS DOMAIN-CONTAINING PROTEIN
Paelopatides00441CS DOMAIN-CONTAINING PROTEIN
Paelopatides00442CS DOMAIN-CONTAINING PROTEIN
Paelopatides00443CS DOMAIN-CONTAINING PROTEIN
Paelopatides00444REVERSE TRANSCRIPTASES
Paelopatides00445-
Paelopatides00446SLIT RELATED LEUCINE-RICH REPEAT NEURONAL PROTEIN
Paelopatides00447G-PROTEIN COUPLED RECEPTOR
Paelopatides00448LEUCOKININ RECEPTOR-RELATED
Paelopatides00449-
Paelopatides00450-
Paelopatides00451-
Paelopatides00452-
Paelopatides00453REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides00454-
Paelopatides00455-
Paelopatides00457-
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