About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides00309DNA-DIRECTED RNA POLYMERASE I SUBUNIT 2
Paelopatides00310DNA-DIRECTED RNA POLYMERASE I SUBUNIT 2
Paelopatides00311DNA-DIRECTED RNA POLYMERASE I SUBUNIT 2
Paelopatides00312DNA-DIRECTED RNA POLYMERASE I SUBUNIT 2
Paelopatides00313D-AMINO ACID OXIDASE
Paelopatides00314-
Paelopatides00315-
Paelopatides00316COILED-COIL DOMAIN-CONTAINING PROTEIN 169
Paelopatides00317PROTEIN CBG26694
Paelopatides00318SLR5058 PROTEIN
Paelopatides00323-
Paelopatides00324PROTEIN CBG26694
Paelopatides00325-
Paelopatides00326GROWTH ARREST AND DNA DAMAGE-INDUCIBLE PROTEINS-INTERACTING PROTEIN 1 GADD45GIP1
Paelopatides00327ANGIOTENSIN-CONVERTING ENZYME
Paelopatides00328ANGIOTENSIN-CONVERTING ENZYME
Paelopatides00329DIMETHYLANILINE MONOOXYGENASE
Paelopatides00330DIMETHYLANILINE MONOOXYGENASE
Paelopatides00331-
Paelopatides00332PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN
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