About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides00187MUCIN 4-RELATED
Paelopatides00188ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides00189MUCIN 4-RELATED
Paelopatides00190PARANEOPLASTIC ANTIGEN
Paelopatides00191-
Paelopatides00192-
Paelopatides00193TOL-PAL SYSTEM PROTEIN TOLA
Paelopatides00194MYND-TYPE DOMAIN-CONTAINING PROTEIN
Paelopatides00195-
Paelopatides00196REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides00197BUCENTAUR RELATED
Paelopatides00198POL PROTEIN
Paelopatides00199-
Paelopatides00200-
Paelopatides00202EUKARYOTIC TRANSLATION INITIATION FACTOR 2C
Paelopatides00203EUKARYOTIC TRANSLATION INITIATION FACTOR 2C
Paelopatides00204-
Paelopatides00205CGI-41 METHYLTRANSFERASE
Paelopatides00206POLY A POLYMERASE CID PAP -RELATED
Paelopatides00207NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE
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