About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides00396CXC DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides00397-
Paelopatides00398EXS-RELATED PROTEIN
Paelopatides00399IG-LIKE DOMAIN-CONTAINING PROTEIN
Paelopatides00400NETRIN RECEPTOR UNC5
Paelopatides00401-
Paelopatides00402-
Paelopatides00403-
Paelopatides00404SULFATE TRANSPORTER
Paelopatides00405PLEXIN
Paelopatides00406-
Paelopatides00407SI:CH211-196P9.1-RELATED
Paelopatides00408-
Paelopatides00409HAT FAMILY DIMERISATION DOMAINCONTAINING PROTEIN-RELATED
Paelopatides00410ATP-DEPENDENT DNA HELICASE
Paelopatides00411HAT FAMILY DIMERISATION DOMAINCONTAINING PROTEIN-RELATED
Paelopatides00412TRANSPOSON
Paelopatides00413PROTEIN CBG26694
Paelopatides00414ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides00415ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
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