About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40%57,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides59712
Paelopatides59713
Paelopatides59714GLUTAMATE SEMIALDEHYDE DEHYDROGENASE
Paelopatides59715PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN
Paelopatides59716
Paelopatides59717PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN
Paelopatides59718PROTEASE-ASSOCIATED DOMAIN-CONTAINING PROTEIN
Paelopatides59719RETROTRANSPOSON
Paelopatides59720PHD-TYPE DOMAIN-CONTAINING PROTEIN
Paelopatides59721PROTOPORPHYRINOGEN OXIDASE
Paelopatides59722CARBOXYPEPTIDASE REGULATORY REGION-CONTAINING
Paelopatides59723
Paelopatides59724OLIGORIBONUCLEASE, MITOCHONDRIAL
Paelopatides59725ADHESION G-PROTEIN COUPLED RECEPTOR V1
Paelopatides59726
Paelopatides59727
Paelopatides59728
Paelopatides59729
Paelopatides59730
Paelopatides59731
Paelopatides59732NETRIN RECEPTOR UNC5
Paelopatides59733PROTEIN CBG26694
Paelopatides59734SMALL NUCLEAR RIBONUCLEOPROTEIN-ASSOCIATED PROTEIN B AND N
Paelopatides59735BAP28
Paelopatides59736XANTHINE DEHYDROGENASE
Paelopatides59737HEMOPEXIN DOMAIN-CONTAINING PROTEIN
Paelopatides59738FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides59739DOUBLECORTIN DOMAIN CONTAINING 2
Paelopatides59740
Paelopatides59741RETROTRANSPOSON
Paelopatides59742
Paelopatides59743
Paelopatides59744CENTROSOMAL PROTEIN 2
Paelopatides59745
Paelopatides59746
Paelopatides59747PDF RECEPTOR-LIKE PROTEIN-RELATED
Paelopatides59748ADHESION G-PROTEIN COUPLED RECEPTOR
Paelopatides59749SI:CH211-108C17.2-RELATED-RELATED
Paelopatides59750SUBGROUP IIII AMINOTRANSFERASE
Paelopatides59751
Paelopatides59752
Paelopatides59753
Paelopatides59754
Paelopatides59755
Paelopatides59756
Paelopatides59757
Paelopatides59758RING FINGER DOMAIN-CONTAINING, POLYCOMB GROUP COMPONENT
Paelopatides59759
Paelopatides59760
Paelopatides59761
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