The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Paelopatides sp. Yap | Echinodermata | Paelopatides sp. Yap | Deep sea | 6,633 | Yap Trench at 8°1′22"N; 137°50′41"E | - |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| - | 3.7Gb | Contig | 2020 | - | Fujian Agriculture and Forestry University | PRJCA003789 | 89.40% | 57,522 |
| Title | Journal | Pubmed ID |
|---|---|---|
| The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environments | iScience | 36444293 |
| Gene ID | Description |
|---|---|
| Paelopatides59868 | ASPARTYL/LYSYL-TRNA SYNTHETASE |
| Paelopatides59869 | ASPARTYL/LYSYL-TRNA SYNTHETASE |
| Paelopatides59870 | HAT FAMILY DIMERISATION DOMAINCONTAINING PROTEIN-RELATED |
| Paelopatides59871 | HAT FAMILY DIMERISATION DOMAINCONTAINING PROTEIN-RELATED |
| Paelopatides59872 | |
| Paelopatides59873 | RBR FAMILY RING FINGER AND IBR DOMAIN-CONTAINING |
| Paelopatides59874 | - |
| Paelopatides59875 | BASIC HELIX-LOOP-HELIX ZIP TRANSCRIPTION FACTOR |
| Paelopatides59876 | SI:CH211-108C17.2-RELATED-RELATED |
| Paelopatides59877 | RBR FAMILY RING FINGER AND IBR DOMAIN-CONTAINING |
| Paelopatides59878 | HAT FAMILY DIMERISATION DOMAINCONTAINING PROTEIN-RELATED |
| Paelopatides59879 | N-ACETYLATED-ALPHA-LINKED ACIDIC DIPEPTIDASE |
| Paelopatides59880 | |
| Paelopatides59881 | |
| Paelopatides59882 | |
| Paelopatides59883 | |
| Paelopatides59884 | |
| Paelopatides59885 | HISTONE-LYSINE N-METHYLTRANSFERASE SUV39H |
| Paelopatides59886 | |
| Paelopatides59887 | CENTROSOMAL PROTEIN OF 128 KDA |
| Paelopatides59888 | DNA POLYMERASE TYPE-X FAMILY MEMBER |
| Paelopatides59889 | |
| Paelopatides59890 | |
| Paelopatides59891 | RCC1 DOMAIN-CONTAINING PROTEIN 1 |
| Paelopatides59892 | DNA POLYMERASE TYPE-X FAMILY MEMBER |
| Paelopatides59893 | SMALL INTEGRAL MEMBRANE PROTEIN 8 |
| Paelopatides59894 | SPORE COAT PROTEIN SP85 |
| Paelopatides59895 | S-ANTIGEN PROTEIN |
| Paelopatides59896 | |
| Paelopatides59897 | TYROSINE-PROTEIN KINASE RECEPTOR |
| Paelopatides59898 | |
| Paelopatides59899 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
| Paelopatides59900 | |
| Paelopatides59901 | SI:CH211-196P9.1-RELATED |
| Paelopatides59902 | IP13529P |
| Paelopatides59903 | NICOLIN 1 |
| Paelopatides59904 | TBC1 DOMAIN FAMILY MEMBER GTPASE-ACTIVATING PROTEIN |
| Paelopatides59905 | MANNOSE, PHOSPHOLIPASE, LECTIN RECEPTOR RELATED |
| Paelopatides59906 | - |
| Paelopatides59907 | PROTEIN CBG26694 |
| Paelopatides59908 | |
| Paelopatides59909 | FIBRINOGEN/TENASCIN/ANGIOPOEITIN |
| Paelopatides59910 | |
| Paelopatides59911 | HISTAMINE RECEPTOR-RELATED G-PROTEIN COUPLED RECEPTOR |
| Paelopatides59912 | BREAST CANCER METASTASIS-SUPPRESSOR 1 |
| Paelopatides59913 | ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides59914 | PULMONARY SURFACTANT-ASSOCIATED PROTEIN A |
| Paelopatides59915 | FOUR AND A HALF LIM DOMAINS PROTEIN |
| Paelopatides59916 | PROTEIN CBG26694 |
| Paelopatides59917 | LIM DOMAIN-CONTAINING PROTEIN |
