The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Paelopatides sp. Yap | Echinodermata | Paelopatides sp. Yap | Deep sea | 6,633 | Yap Trench at 8°1′22"N; 137°50′41"E | - |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| - | 3.7Gb | Contig | 2020 | - | Fujian Agriculture and Forestry University | PRJCA003789 | 89.40% | 57,522 |
| Title | Journal | Pubmed ID |
|---|---|---|
| The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environments | iScience | 36444293 |
| Gene ID | Description |
|---|---|
| Paelopatides59973 | ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides59974 | ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides59975 | ADHESION G PROTEIN-COUPLED RECEPTOR G7 |
| Paelopatides59976 | BUCENTAUR RELATED |
| Paelopatides59977 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides59978 | NACHT DOMAIN-CONTAINING PROTEIN |
| Paelopatides59979 | |
| Paelopatides59980 | UNCHARACTERIZED |
| Paelopatides59981 | RIBOSOME BIOGENESIS PROTEIN BRIX |
| Paelopatides59982 | TRANSPOSON TY3-I GAG-POL POLYPROTEIN |
| Paelopatides59983 | |
| Paelopatides59984 | SIGNALING LYMPHOCYTIC ACTIVATION MOLECULE |
| Paelopatides59985 | F5/8 TYPE C DOMAIN-CONTAINING PROTEIN-RELATED |
| Paelopatides59986 | |
| Paelopatides59987 | F5/8 TYPE C DOMAIN-CONTAINING PROTEIN-RELATED |
| Paelopatides59988 | |
| Paelopatides59989 | PROTEIN CBG26694 |
| Paelopatides59990 | SPINDLE AND CENTRIOLE ASSOCIATED PROTEIN 1 SPICE1 |
| Paelopatides59991 | |
| Paelopatides59992 | SERINE/THREONINE-PROTEIN KINASE PLK |
| Paelopatides59993 | |
| Paelopatides59994 | 5'-NUCLEOTIDASE-RELATED |
| Paelopatides59995 | MANNOSE, PHOSPHOLIPASE, LECTIN RECEPTOR RELATED |
| Paelopatides59996 | C-TYPE LECTIN SUPERFAMILY MEMBER |
| Paelopatides59997 | |
| Paelopatides59998 | |
| Paelopatides59999 | NETRIN RECEPTOR UNC5 |
| Paelopatides60000 | ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides60001 | ULP_PROTEASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides60002 | ADRENERGIC RECEPTOR-RELATED G-PROTEIN COUPLED RECEPTOR |
| Paelopatides60003 | ADRENERGIC RECEPTOR-RELATED G-PROTEIN COUPLED RECEPTOR |
| Paelopatides60004 | PROTEIN CBG26694 |
| Paelopatides60005 | PROTEIN CBG26694 |
| Paelopatides60006 | PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides60007 | BEN DOMAIN-CONTAINING PROTEIN 4 |
| Paelopatides60008 | INACTIVE TYROSINE-PROTEIN KINASE 7 |
| Paelopatides60009 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides60010 | FAS-ASSOCIATING DEATH DOMAIN-CONTAINING PROTEIN FADD |
| Paelopatides60011 | COMPLEMENT COMPONENT 1, S SUBCOMPONENT-RELATED |
| Paelopatides60012 | DNA HELICASE RECQ FAMILY MEMBER |
| Paelopatides60013 | INTEGRASE CATALYTIC DOMAIN-CONTAINING PROTEIN-RELATED |
| Paelopatides60014 | TRANSPOSASE, PUTATIVE-RELATED |
| Paelopatides60015 | TRANSPOSASE, PUTATIVE-RELATED |
| Paelopatides60016 | ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides60017 | ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides60018 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides60019 | UNCHARACTERIZED |
| Paelopatides60020 | PRO-THYROTROPIN-RELEASING HORMONE |
| Paelopatides60021 | UNCHARACTERIZED |
| Paelopatides60023 | TONSOKU-LIKE PROTEIN |
