The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Paelopatides sp. Yap | Echinodermata | Paelopatides sp. Yap | Deep sea | 6,633 | Yap Trench at 8°1′22"N; 137°50′41"E | - |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| - | 3.7Gb | Contig | 2020 | - | Fujian Agriculture and Forestry University | PRJCA003789 | 89.40% | 57,522 |
| Title | Journal | Pubmed ID |
|---|---|---|
| The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environments | iScience | 36444293 |
| Gene ID | Description |
|---|---|
| Paelopatides60074 | GTP-BINDING |
| Paelopatides60075 | |
| Paelopatides60076 | POLYCYSTIN FAMILY MEMBER |
| Paelopatides60077 | |
| Paelopatides60078 | |
| Paelopatides60079 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides60080 | |
| Paelopatides60081 | |
| Paelopatides60082 | L1 TRANSPOSABLE ELEMENT-RELATED |
| Paelopatides60083 | MCG48959-RELATED |
| Paelopatides60084 | |
| Paelopatides60085 | UNCHARACTERIZED |
| Paelopatides60086 | |
| Paelopatides60087 | HMG DOMAIN-CONTAINING PROTEIN 3 |
| Paelopatides60088 | HEPATOCELLULAR CARCINOMA-ASSOCIATED ANTIGEN |
| Paelopatides60089 | |
| Paelopatides60090 | |
| Paelopatides60091 | DNA-DIRECTED RNA POLYMERASES I, II, AND III |
| Paelopatides60092 | DISCS LARGE |
| Paelopatides60093 | ENDONUCLEASE |
| Paelopatides60094 | |
| Paelopatides60095 | ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides60096 | SODIUM/CHLORIDE DEPENDENT TRANSPORTER |
| Paelopatides60097 | CYTOCHROME P450 FAMILY 46 SUBFAMILY A |
| Paelopatides60098 | |
| Paelopatides60099 | TRANSPOSON |
| Paelopatides60100 | |
| Paelopatides60101 | |
| Paelopatides60102 | BONUS, ISOFORM C-RELATED |
| Paelopatides60103 | REVERSE TRANSCRIPTASES |
| Paelopatides60104 | ZGC:195170 |
| Paelopatides60105 | SI:CH211-108C17.2-RELATED-RELATED |
| Paelopatides60106 | |
| Paelopatides60107 | |
| Paelopatides60108 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides60109 | SOX TRANSCRIPTION FACTOR |
| Paelopatides60110 | ACTIN |
| Paelopatides60111 | GLYCINE AMIDINOTRANSFERASE, MITOCHONDRIAL |
| Paelopatides60112 | ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides60113 | ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides60114 | SET DOMAIN-CONTAINING PROTEIN-RELATED |
| Paelopatides60115 | |
| Paelopatides60116 | HYPOXIA-INDUCIBLE FACTOR 1 ALPHA INHIBITOR-RELATED |
| Paelopatides60117 | ADIPOR/PROGESTIN RECEPTOR-RELATED |
| Paelopatides60118 | |
| Paelopatides60119 | ZINC KNUCKLE DOMAINCONTAINING PROTEIN-RELATED |
| Paelopatides60120 | ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides60121 | |
| Paelopatides60122 | LEUCOKININ RECEPTOR-RELATED |
| Paelopatides60123 | RAS-ASSOCIATING DOMAIN-CONTAINING PROTEIN |
