The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Paelopatides sp. Yap | Echinodermata | Paelopatides sp. Yap | Deep sea | 6,633 | Yap Trench at 8°1′22"N; 137°50′41"E | - |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
- | 3.7Gb | Contig | 2020 | - | Fujian Agriculture and Forestry University | PRJCA003789 | 89.40% | 57,522 |
Title | Journal | Pubmed ID |
---|---|---|
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environments | iScience | 36444293 |
Gene ID | Description |
---|---|
Paelopatides60174 | PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN |
Paelopatides60175 | |
Paelopatides60176 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Paelopatides60177 | |
Paelopatides60178 | |
Paelopatides60179 | REVERSE TRANSCRIPTASE |
Paelopatides60180 | |
Paelopatides60181 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Paelopatides60182 | |
Paelopatides60183 | |
Paelopatides60184 | |
Paelopatides60185 | ANAPHASE-PROMOTING COMPLEX SUBUNIT 13 |
Paelopatides60186 | HISTONE H2A |
Paelopatides60187 | GAMMA-SECRETASE SUBUNIT PEN-2 |
Paelopatides60188 | U2 SNRNP AUXILIARY FACTOR, SMALL SUBUNIT |
Paelopatides60189 | LEUCOKININ RECEPTOR-RELATED |
Paelopatides60190 | MYND-TYPE DOMAIN-CONTAINING PROTEIN |
Paelopatides60191 | ULP_PROTEASE DOMAIN-CONTAINING PROTEIN |
Paelopatides60192 | |
Paelopatides60193 | |
Paelopatides60194 | |
Paelopatides60195 | ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN |
Paelopatides60196 | |
Paelopatides60197 | |
Paelopatides60198 | |
Paelopatides60199 | UBIQUITIN LIGASE E3 ALPHA-RELATED |
Paelopatides60200 | SET DOMAIN-CONTAINING PROTEIN-RELATED |
Paelopatides60201 | |
Paelopatides60202 | |
Paelopatides60203 | |
Paelopatides60204 | |
Paelopatides60205 | |
Paelopatides60206 | EGALITARIAN, ISOFORM B |
Paelopatides60207 | 52 KDA REPRESSOR OF THE INHIBITOR OF THE PROTEIN KINASE-LIKE PROTEIN-RELATED |
Paelopatides60208 | |
Paelopatides60209 | |
Paelopatides60210 | HAT FAMILY DIMERISATION DOMAINCONTAINING PROTEIN-RELATED |
Paelopatides60211 | |
Paelopatides60212 | PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4 |
Paelopatides60213 | |
Paelopatides60214 | ZINC FINGER BED DOMAIN-CONTAINING PROTEIN 4 |
Paelopatides60215 | RAS-ASSOCIATING DOMAIN-CONTAINING PROTEIN |
Paelopatides60216 | |
Paelopatides60217 | RETROTRANSPOSON |
Paelopatides60218 | PHD-TYPE DOMAIN-CONTAINING PROTEIN |
Paelopatides60219 | |
Paelopatides60220 | FIBRINOGEN/TENASCIN/ANGIOPOEITIN |
Paelopatides60221 | MICROSOMAL SIGNAL PEPTIDASE 25 KDA SUBUNIT |
Paelopatides60222 | |
Paelopatides60223 | ZINC FINGER BED DOMAIN-CONTAINING PROTEIN 4 |