The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Paelopatides sp. Yap | Echinodermata | Paelopatides sp. Yap | Deep sea | 6,633 | Yap Trench at 8°1′22"N; 137°50′41"E | - |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
- | 3.7Gb | Contig | 2020 | - | Fujian Agriculture and Forestry University | PRJCA003789 | 89.40% | 57,522 |
Title | Journal | Pubmed ID |
---|---|---|
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environments | iScience | 36444293 |
Gene ID | Description |
---|---|
Paelopatides60024 | TONSOKU-LIKE PROTEIN |
Paelopatides60025 | PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN |
Paelopatides60026 | TONSOKU-LIKE PROTEIN |
Paelopatides60027 | MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 10 |
Paelopatides60028 | DISCS LARGE |
Paelopatides60029 | FORKHEAD-ASSOCIATED DOMAIN-CONTAINING PROTEIN 1-RELATED |
Paelopatides60030 | PROTEIN/NUCLEIC ACID DEGLYCASE DJ-1-RELATED |
Paelopatides60031 | PROTEIN CBG26694 |
Paelopatides60032 | TRANSPOSON TY3-I GAG-POL POLYPROTEIN |
Paelopatides60033 | ENZYMATIC POLYPROTEIN-RELATED |
Paelopatides60034 | CYTOCHROME C OXIDASE POLYPEPTIDE VIC-2 |
Paelopatides60035 | |
Paelopatides60036 | ZINC KNUCKLE DOMAINCONTAINING PROTEIN-RELATED |
Paelopatides60037 | |
Paelopatides60038 | PROTEIN CBG26694 |
Paelopatides60039 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Paelopatides60040 | PEROXISOMAL SARCOSINE OXIDASE |
Paelopatides60041 | PEROXISOMAL SARCOSINE OXIDASE |
Paelopatides60042 | ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN |
Paelopatides60043 | UNCHARACTERIZED |
Paelopatides60044 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Paelopatides60045 | SRCR DOMAIN-CONTAINING PROTEIN |
Paelopatides60046 | SRCR DOMAIN-CONTAINING PROTEIN |
Paelopatides60047 | PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN |
Paelopatides60048 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Paelopatides60049 | CODANIN-1 |
Paelopatides60050 | CODANIN-1 |
Paelopatides60051 | APOPTOSIS REGULATORY PROTEIN SIVA |
Paelopatides60052 | |
Paelopatides60053 | |
Paelopatides60054 | ENDONUCLEASE |
Paelopatides60055 | MULTICOPPER OXIDASE-RELATED |
Paelopatides60056 | |
Paelopatides60057 | PATCHED-RELATED |
Paelopatides60058 | NEUROPEPTIDE RECEPTOR-RELATED G-PROTEIN COUPLED RECEPTOR |
Paelopatides60059 | PATCHED-RELATED |
Paelopatides60060 | DNA HELICASE RECQ FAMILY MEMBER |
Paelopatides60061 | ALPHA-2,3-SIALYLTRANSFERASE ST3GAL I ISOFORM X1 |
Paelopatides60062 | ALPHA-2,3-SIALYLTRANSFERASE ST3GAL I ISOFORM X1 |
Paelopatides60063 | ALPHA-2,3-SIALYLTRANSFERASE ST3GAL I ISOFORM X1 |
Paelopatides60064 | SUSHI DOMAIN-CONTAINING PROTEIN 1 |
Paelopatides60065 | REVERSE TRANSCRIPTASES |
Paelopatides60066 | |
Paelopatides60067 | NECTIN-RELATED |
Paelopatides60068 | |
Paelopatides60069 | PROTEIN-COUPLED RECEPTOR GPR1, PUTATIVE-RELATED |
Paelopatides60070 | |
Paelopatides60071 | |
Paelopatides60072 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
Paelopatides60073 | PROGRAMMED CELL DEATH 4 |