About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40%57,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides60124HELICASE RELATED
Paelopatides60125ENDONUCLEASE-RELATED
Paelopatides60126
Paelopatides60127
Paelopatides60128PROTEIN CBG26694
Paelopatides60129
Paelopatides60130
Paelopatides60131GTP-BINDING
Paelopatides60132
Paelopatides60133LD33804P
Paelopatides60134E3 UBIQUITIN-PROTEIN LIGASE PELLINO-RELATED
Paelopatides60135
Paelopatides60136
Paelopatides60137
Paelopatides60138ATP-DEPENDENT DNA HELICASE
Paelopatides60139THAP DOMAIN PROTEIN
Paelopatides60140THAP DOMAIN PROTEIN
Paelopatides60141CXC DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides60142FAS-ASSOCIATING DEATH DOMAIN-CONTAINING PROTEIN FADD
Paelopatides60143ZINC KNUCKLE DOMAINCONTAINING PROTEIN-RELATED
Paelopatides60144POL PROTEIN
Paelopatides60145
Paelopatides60146TUBERIN
Paelopatides60147CADHERIN-87A
Paelopatides60148
Paelopatides60149PROTEIN CBG26694
Paelopatides60150
Paelopatides60151CARBOHYDRATE SULFOTRANSFERASE
Paelopatides60152
Paelopatides60153
Paelopatides60154PROTEIN, PUTATIVE-RELATED
Paelopatides60155
Paelopatides60156
Paelopatides60157
Paelopatides60158ANK_REP_REGION DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides60159SRCR DOMAIN-CONTAINING PROTEIN
Paelopatides60160PROTEIN CBG26694
Paelopatides60161
Paelopatides60162ENDONUCLEASE
Paelopatides60163
Paelopatides60164
Paelopatides60165FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides60166PROTEIN CBG20422
Paelopatides60167SET DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides60168PROTEIN CBG26694
Paelopatides60169EPM2A-INTERACTING PROTEIN 1
Paelopatides60170
Paelopatides60171PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN
Paelopatides60172FORKHEAD BOX PROTEIN
Paelopatides60173PR DOMAIN ZINC FINGER PROTEIN
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