The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Paelopatides sp. Yap | Echinodermata | Paelopatides sp. Yap | Deep sea | 6,633 | Yap Trench at 8°1′22"N; 137°50′41"E | - |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| - | 3.7Gb | Contig | 2020 | - | Fujian Agriculture and Forestry University | PRJCA003789 | 89.40% | 57,522 |
| Title | Journal | Pubmed ID |
|---|---|---|
| The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environments | iScience | 36444293 |
| Gene ID | Description |
|---|---|
| Paelopatides60224 | UNCHARACTERIZED |
| Paelopatides60225 | PROTEIN CBG26694 |
| Paelopatides60226 | |
| Paelopatides60227 | |
| Paelopatides60228 | NACHT DOMAIN-CONTAINING PROTEIN |
| Paelopatides60229 | FIBRINOGEN/TENASCIN/ANGIOPOEITIN |
| Paelopatides60230 | ENDONUCLEASE |
| Paelopatides60231 | TRYPSIN-RELATED |
| Paelopatides60232 | |
| Paelopatides60233 | |
| Paelopatides60234 | |
| Paelopatides60236 | NACHT DOMAIN-CONTAINING PROTEIN |
| Paelopatides60237 | TRANSCRIPTASE, PUTATIVE-RELATED-RELATED |
| Paelopatides60238 | FI04643P-RELATED |
| Paelopatides60239 | SERINE/THREONINE-PROTEIN KINASE |
| Paelopatides60240 | RIBOSOMAL PROTEIN S6 KINASE |
| Paelopatides60241 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides60242 | MACOILIN |
| Paelopatides60243 | MACOILIN |
| Paelopatides60244 | ZINC FINGER PROTEIN |
| Paelopatides60246 | |
| Paelopatides60247 | TRANSPOSON |
| Paelopatides60248 | RETROTRANSPOSON |
| Paelopatides60249 | RETROTRANSPOSON |
| Paelopatides60250 | |
| Paelopatides60251 | BUCENTAUR RELATED |
| Paelopatides60252 | |
| Paelopatides60253 | BUCENTAUR RELATED |
| Paelopatides60254 | REVERSE TRANSCRIPTASES |
| Paelopatides60256 | |
| Paelopatides60257 | |
| Paelopatides60258 | PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides60259 | UROPORPHYRINOGEN III SYNTHASE |
| Paelopatides60260 | UDP-D-XYLOSE:L-FUCOSE ALPHA-1,3-D-XYLOSYLTRANSFERASE-RELATED |
| Paelopatides60261 | NF-KAPPA-B ESSENTIAL MODULATOR |
| Paelopatides60262 | UDP-D-XYLOSE:L-FUCOSE ALPHA-1,3-D-XYLOSYLTRANSFERASE-RELATED |
| Paelopatides60263 | PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides60264 | |
| Paelopatides60265 | INTER-ALPHA-TRYPSIN INHIBITOR HEAVY CHAIN FAMILY MEMBER |
| Paelopatides60266 | |
| Paelopatides60267 | |
| Paelopatides60268 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
| Paelopatides60269 | MYOTONIC DYSTROPHY S/T KINASE-RELATED |
| Paelopatides60270 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides60271 | MYOTONIC DYSTROPHY S/T KINASE-RELATED |
| Paelopatides60272 | |
| Paelopatides60273 | PROTEIN CBG26694 |
| Paelopatides60274 | |
| Paelopatides60275 | |
| Paelopatides60276 | FIBRINOGEN/TENASCIN/ANGIOPOEITIN |
