The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Paelopatides sp. Yap | Echinodermata | Paelopatides sp. Yap | Deep sea | 6,633 | Yap Trench at 8°1′22"N; 137°50′41"E | - |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| - | 3.7Gb | Contig | 2020 | - | Fujian Agriculture and Forestry University | PRJCA003789 | 89.40% | 57,522 |
| Title | Journal | Pubmed ID |
|---|---|---|
| The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environments | iScience | 36444293 |
| Gene ID | Description |
|---|---|
| Paelopatides60380 | EPM2A-INTERACTING PROTEIN 1 |
| Paelopatides60381 | TRANSLIN AND TRANSLIN ASSOCIATED PROTEIN X |
| Paelopatides60382 | TRANSLIN AND TRANSLIN ASSOCIATED PROTEIN X |
| Paelopatides60383 | HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED |
| Paelopatides60384 | |
| Paelopatides60385 | UDP-GLUCOSE DEHYDROGENASE/UDP-MANNAC DEHYDROGENASE |
| Paelopatides60386 | RAS-ASSOCIATING DOMAIN-CONTAINING PROTEIN |
| Paelopatides60387 | UDP-GLUCOSE DEHYDROGENASE/UDP-MANNAC DEHYDROGENASE |
| Paelopatides60388 | PROTEIN CBG26694 |
| Paelopatides60389 | ALPHA- 1,3 -FUCOSYLTRANSFERASE |
| Paelopatides60395 | E3 SUMO-PROTEIN LIGASE CBX4 |
| Paelopatides60396 | |
| Paelopatides60397 | |
| Paelopatides60398 | |
| Paelopatides60399 | N-FATTY-ACYL-AMINO ACID SYNTHASE/HYDROLASE PM20D1 |
| Paelopatides60400 | |
| Paelopatides60401 | POTASSIUM CHANNEL, SUBFAMILY K |
| Paelopatides60402 | CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED |
| Paelopatides60403 | MAP/MICROTUBULE AFFINITY-REGULATING KINASE |
| Paelopatides60404 | |
| Paelopatides60405 | |
| Paelopatides60406 | |
| Paelopatides60407 | |
| Paelopatides60408 | |
| Paelopatides60409 | |
| Paelopatides60410 | |
| Paelopatides60411 | RIBONUCLEOSIDE-DIPHOSPHATE REDUCTASE LARGE CHAIN |
| Paelopatides60412 | DNA POLYMERASE CATALYTIC SUBUNIT |
| Paelopatides60413 | |
| Paelopatides60414 | |
| Paelopatides60415 | |
| Paelopatides60416 | |
| Paelopatides60417 | ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides60418 | |
| Paelopatides60419 | |
| Paelopatides60420 | |
| Paelopatides60421 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides60422 | FAS-ASSOCIATING DEATH DOMAIN-CONTAINING PROTEIN FADD |
| Paelopatides60423 | |
| Paelopatides60424 | ZINC KNUCKLE DOMAINCONTAINING PROTEIN-RELATED |
| Paelopatides60425 | PROTEIN CBG26694 |
| Paelopatides60426 | ZINC PHOSPHODIESTERASE ELAC PROTEIN 2 |
| Paelopatides60427 | ZINC PHOSPHODIESTERASE ELAC PROTEIN 2 |
| Paelopatides60428 | |
| Paelopatides60430 | |
| Paelopatides60431 | |
| Paelopatides60432 | |
| Paelopatides60433 | |
| Paelopatides60434 | NITRIC OXIDE SYNTHASE OXYGENASE |
| Paelopatides60435 | NITRIC OXIDE SYNTHASE OXYGENASE |
