About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40%57,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides60538
Paelopatides60539DYNACTIN 1-RELATED MICROTUBULE-BINDING
Paelopatides60540
Paelopatides60541NONSENSE-MEDIATED MRNA DECAY PROTEIN 2 UP-FRAMESHIFT SUPPRESSOR 2
Paelopatides60542
Paelopatides60543NONSENSE-MEDIATED MRNA DECAY PROTEIN 2 UP-FRAMESHIFT SUPPRESSOR 2
Paelopatides60544PROTEIN CBG26694
Paelopatides60545
Paelopatides60546
Paelopatides60547ENZYMATIC POLYPROTEIN-RELATED
Paelopatides60548
Paelopatides60549
Paelopatides60550
Paelopatides60551WD-REPEAT PROTEIN INTERACTING WITH PHOSPHOINOSIDES WIPI -RELATED
Paelopatides60552
Paelopatides60553
Paelopatides60554BUCENTAUR RELATED
Paelopatides60555
Paelopatides60556NETRIN RECEPTOR UNC5
Paelopatides60557
Paelopatides60558SLIT RELATED LEUCINE-RICH REPEAT NEURONAL PROTEIN
Paelopatides60559DNA HELICASE RECQ FAMILY MEMBER
Paelopatides60560
Paelopatides60561
Paelopatides60562HEDGEHOG
Paelopatides60563
Paelopatides60564GTPASE, IMAP FAMILY MEMBER-RELATED
Paelopatides60565AGAP008228-PA
Paelopatides60566
Paelopatides60570PROTEIN-COUPLED RECEPTOR GPR1, PUTATIVE-RELATED
Paelopatides60571PROTEIN CBG26694
Paelopatides60572DNA REPAIR PROTEIN COMPLEMENTING XP-G CELLS-RELATED
Paelopatides60573
Paelopatides60574
Paelopatides60575POL PROTEIN
Paelopatides60576
Paelopatides60577UNCHARACTERIZED
Paelopatides60578EPM2A-INTERACTING PROTEIN 1
Paelopatides60579EPM2A-INTERACTING PROTEIN 1
Paelopatides60580ENDONUCLEASE-RELATED
Paelopatides60581
Paelopatides60582MUCIN 4-RELATED
Paelopatides60583MUCIN 4-RELATED
Paelopatides60585RHO GUANINE NUCLEOTIDE EXCHANGE FACTOR 4
Paelopatides60586SIGNAL RECOGNITION PARTICLE 19 KD PROTEIN
Paelopatides60587RETROTRANSPOSON
Paelopatides60588RETROTRANSPOSON
Paelopatides60589MULTICOPPER OXIDASE-RELATED
Paelopatides60590
Paelopatides60591
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