The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Paelopatides sp. Yap | Echinodermata | Paelopatides sp. Yap | Deep sea | 6,633 | Yap Trench at 8°1′22"N; 137°50′41"E | - |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| - | 3.7Gb | Contig | 2020 | - | Fujian Agriculture and Forestry University | PRJCA003789 | 89.40% | 57,522 |
| Title | Journal | Pubmed ID |
|---|---|---|
| The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environments | iScience | 36444293 |
| Gene ID | Description |
|---|---|
| Paelopatides60487 | TRANSPOSON TY3-I GAG-POL POLYPROTEIN |
| Paelopatides60488 | |
| Paelopatides60489 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides60490 | ADENOSINE/GUANOSINE DIPHOSPHATASE |
| Paelopatides60491 | TRANSLATION INITIATION FACTOR IF-2-RELATED |
| Paelopatides60492 | F-BOX ONLY PROTEIN 33 |
| Paelopatides60493 | MITOCHONDRIAL ATP SYNTHASE COUPLING FACTOR B |
| Paelopatides60494 | |
| Paelopatides60495 | |
| Paelopatides60496 | PEPTIDASE |
| Paelopatides60497 | RETROTRANSPOSON |
| Paelopatides60498 | |
| Paelopatides60499 | |
| Paelopatides60500 | PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4 |
| Paelopatides60501 | |
| Paelopatides60502 | HAT FAMILY DIMERISATION DOMAINCONTAINING PROTEIN-RELATED |
| Paelopatides60503 | ADENINE DNA GLYCOSYLASE |
| Paelopatides60504 | ADENINE DNA GLYCOSYLASE |
| Paelopatides60505 | |
| Paelopatides60507 | |
| Paelopatides60508 | |
| Paelopatides60509 | SERINE/THREONINE-PROTEIN KINASE |
| Paelopatides60510 | |
| Paelopatides60511 | SYNDECAN |
| Paelopatides60512 | DOMON DOMAIN-CONTAINING PROTEIN FRRS1L |
| Paelopatides60513 | |
| Paelopatides60514 | PROTEIN CBG26694 |
| Paelopatides60515 | ENDONUCLEASE-RELATED |
| Paelopatides60516 | PARANEOPLASTIC ANTIGEN |
| Paelopatides60517 | |
| Paelopatides60518 | |
| Paelopatides60519 | |
| Paelopatides60520 | |
| Paelopatides60521 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides60522 | ZGC:195170 |
| Paelopatides60523 | SI:CH211-108C17.2-RELATED-RELATED |
| Paelopatides60524 | GLUTAMATE--TRNA LIGASE |
| Paelopatides60525 | UNCHARACTERIZED |
| Paelopatides60526 | PROTEIN CBG26694 |
| Paelopatides60527 | PROTEIN CBG26694 |
| Paelopatides60528 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides60529 | EQUILIBRATIVE NUCLEOSIDE TRANSPORTER |
| Paelopatides60530 | ENDONUCLEASE-RELATED |
| Paelopatides60531 | POL PROTEIN |
| Paelopatides60532 | PHOSPHORYN, PUTATIVE-RELATED-RELATED |
| Paelopatides60533 | ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides60534 | |
| Paelopatides60535 | EXPRESSED PROTEIN |
| Paelopatides60536 | |
| Paelopatides60537 | DYNACTIN 1-RELATED MICROTUBULE-BINDING |
