The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Paelopatides sp. Yap | Echinodermata | Paelopatides sp. Yap | Deep sea | 6,633 | Yap Trench at 8°1′22"N; 137°50′41"E | - |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| - | 3.7Gb | Contig | 2020 | - | Fujian Agriculture and Forestry University | PRJCA003789 | 89.40% | 57,522 |
| Title | Journal | Pubmed ID |
|---|---|---|
| The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environments | iScience | 36444293 |
| Gene ID | Description |
|---|---|
| Paelopatides60329 | |
| Paelopatides60330 | |
| Paelopatides60331 | |
| Paelopatides60332 | 52 KDA REPRESSOR OF THE INHIBITOR OF THE PROTEIN KINASE-LIKE PROTEIN-RELATED |
| Paelopatides60333 | |
| Paelopatides60334 | ORGANIC ANION TRANSPORTER |
| Paelopatides60335 | ACETYLGLUCOSAMINYLTRANSFERASE |
| Paelopatides60336 | FATTY ACID ACYL TRANSFERASE-RELATED |
| Paelopatides60337 | F5/8 TYPE C DOMAIN-CONTAINING PROTEIN-RELATED |
| Paelopatides60338 | LEPTIN RECEPTOR-RELATED |
| Paelopatides60339 | |
| Paelopatides60340 | PROTEIN CBG26694 |
| Paelopatides60341 | |
| Paelopatides60342 | ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides60343 | |
| Paelopatides60344 | |
| Paelopatides60345 | |
| Paelopatides60346 | SI:CH211-108C17.2-RELATED-RELATED |
| Paelopatides60347 | |
| Paelopatides60348 | INHIBITOR OF GROWTH PROTEIN |
| Paelopatides60349 | |
| Paelopatides60350 | PROTEIN CBG26694 |
| Paelopatides60351 | |
| Paelopatides60352 | E3 UBIQUITIN-PROTEIN LIGASE NHLRC1-RELATED |
| Paelopatides60353 | |
| Paelopatides60354 | NXPE FAMILY MEMBER |
| Paelopatides60355 | |
| Paelopatides60356 | |
| Paelopatides60357 | |
| Paelopatides60358 | COMPLEMENT COMPONENT-RELATED SUSHI DOMAIN-CONTAINING |
| Paelopatides60359 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides60360 | |
| Paelopatides60361 | |
| Paelopatides60362 | COMPLEMENT COMPONENT-RELATED SUSHI DOMAIN-CONTAINING |
| Paelopatides60364 | |
| Paelopatides60365 | E3 UBIQUITIN-PROTEIN LIGASE NHLRC1-RELATED |
| Paelopatides60366 | BNIP - RELATED |
| Paelopatides60367 | |
| Paelopatides60368 | BNIP - RELATED |
| Paelopatides60369 | PROTEIN CBG16200 |
| Paelopatides60370 | NANOS PROTEIN |
| Paelopatides60371 | WD40 REPEAT PF20 |
| Paelopatides60372 | |
| Paelopatides60373 | TRANSCRIPTION INTERMEDIARY FACTOR |
| Paelopatides60374 | TRANSCRIPTION INTERMEDIARY FACTOR |
| Paelopatides60375 | MYB-LIKE PROTEIN V |
| Paelopatides60376 | |
| Paelopatides60377 | PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides60378 | PROPERDIN |
| Paelopatides60379 | EPM2A-INTERACTING PROTEIN 1 |
