The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Paelopatides sp. Yap | Echinodermata | Paelopatides sp. Yap | Deep sea | 6,633 | Yap Trench at 8°1′22"N; 137°50′41"E | - |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| - | 3.7Gb | Contig | 2020 | - | Fujian Agriculture and Forestry University | PRJCA003789 | 89.40% | 57,522 |
| Title | Journal | Pubmed ID |
|---|---|---|
| The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environments | iScience | 36444293 |
| Gene ID | Description |
|---|---|
| Paelopatides60693 | |
| Paelopatides60694 | CULLIN |
| Paelopatides60695 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides60696 | IG-LIKE DOMAIN-CONTAINING PROTEIN |
| Paelopatides60697 | |
| Paelopatides60698 | |
| Paelopatides60699 | EPM2A-INTERACTING PROTEIN 1 |
| Paelopatides60700 | ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides60701 | |
| Paelopatides60702 | |
| Paelopatides60703 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides60704 | |
| Paelopatides60705 | CARBOHYDRATE SULFOTRANSFERASE 15 |
| Paelopatides60706 | |
| Paelopatides60710 | |
| Paelopatides60711 | |
| Paelopatides60712 | |
| Paelopatides60713 | HELICASE SRCAP-RELATED |
| Paelopatides60714 | |
| Paelopatides60715 | |
| Paelopatides60716 | HEPARAN SULFATE SULFOTRANSFERASE |
| Paelopatides60717 | |
| Paelopatides60718 | UNCHARACTERIZED |
| Paelopatides60719 | RETROVIRUS-RELATED POL POLYPROTEIN FROM TRANSPOSON 412-LIKE PROTEIN-RELATED |
| Paelopatides60720 | |
| Paelopatides60721 | SI:CH211-196P9.1-RELATED |
| Paelopatides60722 | IP13529P |
| Paelopatides60723 | |
| Paelopatides60724 | BONUS, ISOFORM C-RELATED |
| Paelopatides60725 | IP13529P |
| Paelopatides60726 | IP13529P |
| Paelopatides60727 | ANK_REP_REGION DOMAIN-CONTAINING PROTEIN |
| Paelopatides60728 | NUCLEOTIDE KINASE |
| Paelopatides60729 | NICASTRIN |
| Paelopatides60730 | |
| Paelopatides60731 | EGALITARIAN, ISOFORM B |
| Paelopatides60732 | EGALITARIAN, ISOFORM B |
| Paelopatides60733 | |
| Paelopatides60734 | BASIC HELIX-LOOP-HELIX ZIP TRANSCRIPTION FACTOR |
| Paelopatides60735 | MYD88 |
| Paelopatides60736 | DIHYDROFOLATE REDUCTASE |
| Paelopatides60737 | BIFUNCTIONAL PURINE BIOSYNTHESIS PROTEIN PURH |
| Paelopatides60738 | BIFUNCTIONAL PURINE BIOSYNTHESIS PROTEIN PURH |
| Paelopatides60739 | PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides60740 | TRANSPOSASE, PUTATIVE-RELATED |
| Paelopatides60741 | SRCR DOMAIN-CONTAINING PROTEIN |
| Paelopatides60742 | SRCR DOMAIN-CONTAINING PROTEIN |
| Paelopatides60743 | |
| Paelopatides60744 | |
| Paelopatides60745 | CYTOCHROME B-245 LIGHT CHAIN |
