The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Paelopatides sp. Yap | Echinodermata | Paelopatides sp. Yap | Deep sea | 6,633 | Yap Trench at 8°1′22"N; 137°50′41"E | - |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
- | 3.7Gb | Contig | 2020 | - | Fujian Agriculture and Forestry University | PRJCA003789 | 89.40% | 57,522 |
Title | Journal | Pubmed ID |
---|---|---|
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environments | iScience | 36444293 |
Gene ID | Description |
---|---|
Paelopatides60848 | |
Paelopatides60849 | TYROSINE-PROTEIN KINASE |
Paelopatides60850 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Paelopatides60851 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Paelopatides60852 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Paelopatides60853 | PARANEOPLASTIC ANTIGEN |
Paelopatides60854 | POL PROTEIN |
Paelopatides60855 | NACHT DOMAIN-CONTAINING PROTEIN |
Paelopatides60856 | |
Paelopatides60857 | |
Paelopatides60858 | ZINC KNUCKLE DOMAINCONTAINING PROTEIN-RELATED |
Paelopatides60859 | ENDONUCLEASE-RELATED |
Paelopatides60860 | PROTEIN CBG26694 |
Paelopatides60861 | |
Paelopatides60862 | GRAM DOMAIN-CONTAINING PROTEIN 4 |
Paelopatides60863 | |
Paelopatides60864 | DNA REPLICATION LICENSING FACTOR MCM FAMILY MEMBER |
Paelopatides60865 | |
Paelopatides60866 | |
Paelopatides60867 | |
Paelopatides60868 | ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN |
Paelopatides60869 | BUCENTAUR RELATED |
Paelopatides60870 | PROTEIN SSUH2 HOMOLOG |
Paelopatides60871 | CYCLIN |
Paelopatides60872 | ULP_PROTEASE DOMAIN-CONTAINING PROTEIN |
Paelopatides60873 | |
Paelopatides60874 | |
Paelopatides60875 | DYNEIN HEAVY CHAIN |
Paelopatides60876 | |
Paelopatides60877 | |
Paelopatides60878 | METHIONINE AMINOPEPTIDASE |
Paelopatides60879 | |
Paelopatides60880 | |
Paelopatides60881 | HYDRANTOINASE/DIHYDROPYRIMIDINASE FAMILY MEMBER |
Paelopatides60882 | |
Paelopatides60883 | ULP_PROTEASE DOMAIN-CONTAINING PROTEIN |
Paelopatides60884 | BUCENTAUR RELATED |
Paelopatides60885 | CALCIUM-INDEPENDENT PHOSPHOLIPASE A2 IPLA2 -RELATED |
Paelopatides60886 | |
Paelopatides60887 | |
Paelopatides60888 | FANCONI ANEMIA GROUP E PROTEIN |
Paelopatides60889 | CYCLIC NUCLEOTIDE-GATED CATION CHANNEL SUBUNIT A |
Paelopatides60890 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
Paelopatides60891 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
Paelopatides60892 | BUCENTAUR RELATED |
Paelopatides60893 | PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN |
Paelopatides60894 | |
Paelopatides60895 | RAI16 PROTEIN-RELATED |
Paelopatides60896 | TRANSCRIPTASE, PUTATIVE-RELATED-RELATED |
Paelopatides60897 | FIBRINOGEN/TENASCIN/ANGIOPOEITIN |