The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Paelopatides sp. Yap | Echinodermata | Paelopatides sp. Yap | Deep sea | 6,633 | Yap Trench at 8°1′22"N; 137°50′41"E | - |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| - | 3.7Gb | Contig | 2020 | - | Fujian Agriculture and Forestry University | PRJCA003789 | 89.40% | 57,522 |
| Title | Journal | Pubmed ID |
|---|---|---|
| The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environments | iScience | 36444293 |
| Gene ID | Description |
|---|---|
| Paelopatides61003 | |
| Paelopatides61004 | RAS-ASSOCIATING DOMAIN-CONTAINING PROTEIN |
| Paelopatides61005 | |
| Paelopatides61006 | PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4 |
| Paelopatides61007 | ANKYRIN REPEAT, PH AND SEC7 DOMAIN CONTAINING PROTEIN SECG-RELATED |
| Paelopatides61008 | ANKYRIN REPEAT FAMILY PROTEIN |
| Paelopatides61009 | TAZ PROTEIN TAFAZZIN |
| Paelopatides61010 | TRANSCRIPTION INITIATION FACTOR IIIC TFIIIC , POLYPEPTIDE 6-RELATED |
| Paelopatides61011 | SPLICING FACTOR 45 SPF45 |
| Paelopatides61012 | OPSIN |
| Paelopatides61013 | B2 BRADYKININ RECEPTOR/ANGIOTENSIN II RECEPTOR |
| Paelopatides61014 | B2 BRADYKININ RECEPTOR/ANGIOTENSIN II RECEPTOR |
| Paelopatides61016 | PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides61017 | 52 KDA REPRESSOR OF THE INHIBITOR OF THE PROTEIN KINASE-LIKE PROTEIN-RELATED |
| Paelopatides61018 | |
| Paelopatides61019 | |
| Paelopatides61020 | SI:CH211-196P9.1-RELATED |
| Paelopatides61021 | CENTROSOMAL PROTEIN OF 76 KDA |
| Paelopatides61022 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides61023 | HOMEOBOX PROTEIN SIX |
| Paelopatides61024 | PROTEIN CBG26694 |
| Paelopatides61025 | |
| Paelopatides61026 | EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT G |
| Paelopatides61027 | |
| Paelopatides61028 | |
| Paelopatides61029 | PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides61030 | |
| Paelopatides61031 | ADRENERGIC RECEPTOR-RELATED G-PROTEIN COUPLED RECEPTOR |
| Paelopatides61032 | |
| Paelopatides61033 | |
| Paelopatides61034 | SODIUM-BILE ACID COTRANSPORTER |
| Paelopatides61035 | SODIUM-BILE ACID COTRANSPORTER |
| Paelopatides61036 | PORCUPINE |
| Paelopatides61037 | UNCHARACTERIZED |
| Paelopatides61038 | FOLLICULIN FAMILY MEMBER |
| Paelopatides61039 | |
| Paelopatides61040 | ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides61041 | METALLO PHOSPHOESTERASE RELATED |
| Paelopatides61042 | |
| Paelopatides61043 | ATP-BINDING CASSETTE SUB-FAMILY C |
| Paelopatides61044 | REVERSE TRANSCRIPTASES |
| Paelopatides61045 | GANGLIOSIDE INDUCED DIFFERENTIATION ASSOCIATED PROTEIN 2-RELATED |
| Paelopatides61046 | QUINONE OXIDOREDUCTASE-LIKE PROTEIN 1 |
| Paelopatides61047 | QUINONE OXIDOREDUCTASE-LIKE PROTEIN 1 |
| Paelopatides61048 | |
| Paelopatides61049 | ENDONUCLEASE-RELATED |
| Paelopatides61050 | |
| Paelopatides61051 | RETROTRANSPOSON |
| Paelopatides61052 | EPM2A-INTERACTING PROTEIN 1 |
| Paelopatides61053 | EPM2A-INTERACTING PROTEIN 1 |
