The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Paelopatides sp. Yap | Echinodermata | Paelopatides sp. Yap | Deep sea | 6,633 | Yap Trench at 8°1′22"N; 137°50′41"E | - |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
- | 3.7Gb | Contig | 2020 | - | Fujian Agriculture and Forestry University | PRJCA003789 | 89.40% | 57,522 |
Title | Journal | Pubmed ID |
---|---|---|
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environments | iScience | 36444293 |
Gene ID | Description |
---|---|
Paelopatides60898 | BUCENTAUR RELATED |
Paelopatides60899 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Paelopatides60900 | FIBRINOGEN/TENASCIN/ANGIOPOEITIN |
Paelopatides60901 | FIBRINOGEN/TENASCIN/ANGIOPOEITIN |
Paelopatides60902 | |
Paelopatides60903 | PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN |
Paelopatides60904 | TRANSPOSON TY3-I GAG-POL POLYPROTEIN |
Paelopatides60905 | ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN |
Paelopatides60908 | ADAMTS A DISINTEGRIN AND METALLOPROTEASE WITH THROMBOSPONDIN MOTIFS PROTEASE |
Paelopatides60909 | |
Paelopatides60910 | PROTEIN CBG26694 |
Paelopatides60911 | PROTEIN CBG26694 |
Paelopatides60912 | LEUCINE RICH REPEAT FAMILY PROTEIN |
Paelopatides60913 | |
Paelopatides60914 | FIBRINOGEN/TENASCIN/ANGIOPOEITIN |
Paelopatides60915 | RNA BINDING PROTEIN |
Paelopatides60916 | AXONEMAL INNER ARM DYNEIN LIGHT CHAIN 28 |
Paelopatides60917 | TETRATRICOPEPTIDE REPEAT PROTEIN |
Paelopatides60918 | RNA METHYLASE-RELATED |
Paelopatides60919 | PROTEIN CBG26694 |
Paelopatides60920 | P-LOOP CONTAINING NUCLEOSIDE TRIPHOSPHATE HYDROLASES SUPERFAMILY PROTEIN |
Paelopatides60921 | PEFLIN |
Paelopatides60922 | EPM2A-INTERACTING PROTEIN 1 |
Paelopatides60923 | PROTEIN CBG26694 |
Paelopatides60924 | L1 TRANSPOSABLE ELEMENT-RELATED |
Paelopatides60925 | |
Paelopatides60926 | BRAIN-SPECIFIC ANGIOGENESIS INHIBITOR 1-ASSOCIATED PROTEIN 2 |
Paelopatides60927 | E3 UBIQUITIN-PROTEIN LIGASE TOPORS |
Paelopatides60928 | - |
Paelopatides60929 | - |
Paelopatides60930 | WSCD FAMILY MEMBER CG9164 |
Paelopatides60931 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Paelopatides60932 | BUCENTAUR RELATED |
Paelopatides60933 | WSCD FAMILY MEMBER CG9164 |
Paelopatides60934 | |
Paelopatides60935 | WSCD FAMILY MEMBER CG9164 |
Paelopatides60936 | ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN |
Paelopatides60937 | WSCD FAMILY MEMBER CG9164 |
Paelopatides60938 | REVERSE TRANSCRIPTASES |
Paelopatides60939 | |
Paelopatides60940 | CELLULAR TUMOR ANTIGEN P53 |
Paelopatides60941 | COLLAGEN IV NC1 DOMAIN-CONTAINING PROTEIN |
Paelopatides60942 | |
Paelopatides60943 | DNA-DIRECTED RNA POLYMERASE II |
Paelopatides60944 | FORKHEAD BOX PROTEIN |
Paelopatides60945 | 6-PHOSPHOGLUCONATE DEHYDROGENASE |
Paelopatides60946 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Paelopatides60947 | UDP-D-XYLOSE:L-FUCOSE ALPHA-1,3-D-XYLOSYLTRANSFERASE-RELATED |
Paelopatides60948 | FI04643P-RELATED |
Paelopatides60949 |