The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Paelopatides sp. Yap | Echinodermata | Paelopatides sp. Yap | Deep sea | 6,633 | Yap Trench at 8°1′22"N; 137°50′41"E | - |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
- | 3.7Gb | Contig | 2020 | - | Fujian Agriculture and Forestry University | PRJCA003789 | 89.40% | 57,522 |
Title | Journal | Pubmed ID |
---|---|---|
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environments | iScience | 36444293 |
Gene ID | Description |
---|---|
Paelopatides61054 | PROTEIN B, PUTATIVE-RELATED-RELATED |
Paelopatides61055 | IP13529P |
Paelopatides61056 | |
Paelopatides61057 | |
Paelopatides61058 | |
Paelopatides61059 | EXPRESSED PROTEIN |
Paelopatides61060 | |
Paelopatides61061 | ALANYL-TRNA EDITING PROTEIN |
Paelopatides61062 | |
Paelopatides61063 | PROTEIN, PUTATIVE-RELATED |
Paelopatides61064 | BEN DOMAIN-CONTAINING PROTEIN 6 |
Paelopatides61065 | |
Paelopatides61066 | GH3 DOMAIN-CONTAINING PROTEIN |
Paelopatides61067 | PEPTIDYL-PROLYL CIS-TRANS ISOMERASE |
Paelopatides61068 | CASEIN KINASE II SUBUNIT BETA |
Paelopatides61069 | ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN |
Paelopatides61070 | ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN |
Paelopatides61071 | COMPLEMENT COMPONENT 1, S SUBCOMPONENT-RELATED |
Paelopatides61072 | ADAMTS A DISINTEGRIN AND METALLOPROTEASE WITH THROMBOSPONDIN MOTIFS PROTEASE |
Paelopatides61073 | SI:CH211-108C17.2-RELATED-RELATED |
Paelopatides61074 | ZGC:195170 |
Paelopatides61075 | ZINC KNUCKLE DOMAINCONTAINING PROTEIN-RELATED |
Paelopatides61076 | SEMINAL PLASMA PROTEIN |
Paelopatides61077 | THROMBOSPONDIN-TYPE LAMININ G DOMAIN AND EAR REPEAT-CONTAINING |
Paelopatides61078 | |
Paelopatides61079 | WSCD FAMILY MEMBER CG9164 |
Paelopatides61080 | |
Paelopatides61081 | ADHESION G-PROTEIN COUPLED RECEPTOR |
Paelopatides61082 | DNA LIGASE |
Paelopatides61083 | DNA LIGASE |
Paelopatides61084 | WSCD FAMILY MEMBER CG9164 |
Paelopatides61085 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Paelopatides61086 | DNA LIGASE |
Paelopatides61087 | ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN |
Paelopatides61088 | IG-LIKE DOMAIN-CONTAINING PROTEIN |
Paelopatides61089 | |
Paelopatides61090 | NEPHRIN |
Paelopatides61091 | TRANSPOSABLE ELEMENT-RELATED |
Paelopatides61092 | TRIACYLGLYCEROL LIPASE |
Paelopatides61093 | PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4 |
Paelopatides61094 | TRIACYLGLYCEROL LIPASE |
Paelopatides61095 | METALLOPROTEASE INHIBITOR |
Paelopatides61096 | METALLOPROTEASE INHIBITOR |
Paelopatides61097 | THREONINE SYNTHASE-LIKE 1 |
Paelopatides61098 | THREONINE SYNTHASE-LIKE 1 |
Paelopatides61099 | SIMILAR TO DNA SEGMENT, CHR 10, WAYNE STATE UNIVERSITY 102,-EXPRESSED |
Paelopatides61100 | PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4 |
Paelopatides61101 | DIVALENT CATION TRANSPORTER SOLUTE CARRIER FAMILY 41 |
Paelopatides61102 | SMALL INTEGRAL MEMBRANE PROTEIN 4 |
Paelopatides61103 | G/T AND G/U MISMATCH-SPECIFIC DNA GLYCOSYLASE |