About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40%57,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides61155NON-LTR RETROLELEMENT REVERSE TRANSCRIPTASE-LIKE PROTEIN-RELATED
Paelopatides61156
Paelopatides61157NETRIN RECEPTOR UNC5
Paelopatides61158THAP DOMAIN-CONTAINING PROTEIN 9
Paelopatides61159PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4
Paelopatides61160PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4
Paelopatides61161
Paelopatides61162
Paelopatides61163
Paelopatides61164TECTONIC FAMILY MEMBER
Paelopatides61165
Paelopatides61166TRANSPOSON TY3-I GAG-POL POLYPROTEIN
Paelopatides61167ZINC KNUCKLE DOMAINCONTAINING PROTEIN-RELATED
Paelopatides61168
Paelopatides61169PROTEIN CBG26694
Paelopatides61170DENTIN MATRIX PROTEIN 4 PROTEIN FAM20
Paelopatides61171ZINC KNUCKLE DOMAINCONTAINING PROTEIN-RELATED
Paelopatides61172PROTEIN CBG26694
Paelopatides61173CXC DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides61174PROLINE-RICH NUCLEAR RECEPTOR COACTIVATOR
Paelopatides61178ZINC KNUCKLE DOMAINCONTAINING PROTEIN-RELATED
Paelopatides61179PROTEIN CBG26694
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