The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Paelopatides sp. Yap | Echinodermata | Paelopatides sp. Yap | Deep sea | 6,633 | Yap Trench at 8°1′22"N; 137°50′41"E | - |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
- | 3.7Gb | Contig | 2020 | - | Fujian Agriculture and Forestry University | PRJCA003789 | 89.40% | 57,522 |
Title | Journal | Pubmed ID |
---|---|---|
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environments | iScience | 36444293 |
Gene ID | Description |
---|---|
Paelopatides61104 | SWI/SNF-RELATED |
Paelopatides61105 | SWI/SNF-RELATED |
Paelopatides61106 | SWI/SNF-RELATED |
Paelopatides61107 | |
Paelopatides61108 | PROTEIN CBG26694 |
Paelopatides61109 | ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN |
Paelopatides61110 | PARANEOPLASTIC ANTIGEN |
Paelopatides61111 | DUF3504 DOMAIN-CONTAINING PROTEIN |
Paelopatides61112 | TRANSCRIPTASE, PUTATIVE-RELATED-RELATED |
Paelopatides61113 | UNCHARACTERIZED |
Paelopatides61114 | ATP-BINDING CASSETTE SUB-FAMILY C |
Paelopatides61115 | - |
Paelopatides61116 | GTPASE, IMAP FAMILY MEMBER-RELATED |
Paelopatides61117 | ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN |
Paelopatides61118 | EPM2A-INTERACTING PROTEIN 1 |
Paelopatides61120 | ENDONUCLEASE-RELATED |
Paelopatides61121 | DYNEIN HEAVY CHAIN |
Paelopatides61122 | HISTIDINE-RICH GLYCOPROTEIN |
Paelopatides61123 | - |
Paelopatides61124 | HSPC111 PROTEIN-RELATED |
Paelopatides61125 | |
Paelopatides61126 | ZINC FINGER PROTEIN |
Paelopatides61127 | |
Paelopatides61128 | CALCIUM-SENSING RECEPTOR-RELATED |
Paelopatides61129 | |
Paelopatides61130 | |
Paelopatides61131 | |
Paelopatides61132 | MAMMALIAN EPENDYMIN-RELATED PROTEIN 1 |
Paelopatides61133 | TRANSPOSABLE ELEMENT-RELATED |
Paelopatides61134 | |
Paelopatides61135 | |
Paelopatides61136 | GALACTOSE-3-O-SULFOTRANSFERASE |
Paelopatides61137 | CS DOMAIN-CONTAINING PROTEIN |
Paelopatides61138 | CS DOMAIN-CONTAINING PROTEIN |
Paelopatides61139 | - |
Paelopatides61140 | BAND 7 PROTEIN-RELATED |
Paelopatides61141 | - |
Paelopatides61142 | |
Paelopatides61143 | HEPATOCELLULAR CARCINOMA-ASSOCIATED ANTIGEN 66 |
Paelopatides61144 | |
Paelopatides61145 | HEPATOCELLULAR CARCINOMA-ASSOCIATED ANTIGEN 66 |
Paelopatides61146 | |
Paelopatides61147 | ULP_PROTEASE DOMAIN-CONTAINING PROTEIN |
Paelopatides61148 | |
Paelopatides61149 | AAA DOMAIN-CONTAINING |
Paelopatides61150 | ALCOHOL DEHYDROGENASE |
Paelopatides61151 | 15-HYDROXYPROSTAGLANDIN DEHYDROGENASE [NAD(+)] |
Paelopatides61152 | MULTICOPPER OXIDASE-RELATED |
Paelopatides61153 | ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN |
Paelopatides61154 | ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN |