The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Paelopatides sp. Yap | Echinodermata | Paelopatides sp. Yap | Deep sea | 6,633 | Yap Trench at 8°1′22"N; 137°50′41"E | - |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
- | 3.7Gb | Contig | 2020 | - | Fujian Agriculture and Forestry University | PRJCA003789 | 89.40% | 57,522 |
Title | Journal | Pubmed ID |
---|---|---|
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environments | iScience | 36444293 |
Gene ID | Description |
---|---|
Paelopatides60797 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
Paelopatides60798 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
Paelopatides60800 | |
Paelopatides60801 | SAM-DEPENDENT METHYLTRANSFERASE SUPERFAMILY PROTEIN |
Paelopatides60802 | |
Paelopatides60803 | TRANSMEMBRANE PROTEASE SERINE |
Paelopatides60804 | TFIIH, POLYPEPTIDE 4 |
Paelopatides60805 | LYSOSOME-ASSOCIATED MEMBRANE GLYCOPROTEIN |
Paelopatides60806 | OROTATE PHOSPHORIBOSYLTRANSFERASE |
Paelopatides60807 | TUBULIN POLYGLUTAMYLASE |
Paelopatides60808 | |
Paelopatides60809 | |
Paelopatides60810 | EPM2A-INTERACTING PROTEIN 1 |
Paelopatides60811 | BONUS, ISOFORM C-RELATED |
Paelopatides60812 | TRANSPOSON TY3-I GAG-POL POLYPROTEIN |
Paelopatides60813 | SODIUM-COUPLED MONOCARBOXYLATE TRANSPORTER |
Paelopatides60814 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN-RELATED |
Paelopatides60815 | SODIUM-COUPLED MONOCARBOXYLATE TRANSPORTER |
Paelopatides60816 | TRANSPOSON TY3-I GAG-POL POLYPROTEIN |
Paelopatides60817 | RETINOL DEHYDROGENASE-RELATED |
Paelopatides60818 | |
Paelopatides60819 | |
Paelopatides60820 | |
Paelopatides60821 | ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN |
Paelopatides60822 | UNCHARACTERIZED |
Paelopatides60823 | COMM DOMAIN-CONTAINING PROTEIN 1 |
Paelopatides60824 | HAT FAMILY DIMERISATION DOMAINCONTAINING PROTEIN-RELATED |
Paelopatides60825 | VACUOLAR SORTING PROTEIN VPS29 |
Paelopatides60826 | VOLTAGE-DEPENDENT CALCIUM CHANNEL GAMMA SUBUNIT |
Paelopatides60827 | PROTEIN CBG26694 |
Paelopatides60828 | |
Paelopatides60829 | ULP_PROTEASE DOMAIN-CONTAINING PROTEIN |
Paelopatides60830 | |
Paelopatides60831 | TRANSPOSON |
Paelopatides60832 | TRANSPOSON |
Paelopatides60833 | TRANSPOSON |
Paelopatides60834 | |
Paelopatides60835 | PROTEIN CBG26694 |
Paelopatides60836 | |
Paelopatides60837 | RECEPTOR-TYPE TYROSINE-PROTEIN PHOSPHATASE |
Paelopatides60838 | RECEPTOR-TYPE TYROSINE-PROTEIN PHOSPHATASE |
Paelopatides60839 | |
Paelopatides60840 | TRANSCRIPTASE, PUTATIVE-RELATED-RELATED |
Paelopatides60841 | TRANSCRIPTASE, PUTATIVE-RELATED-RELATED |
Paelopatides60842 | 50S RIBOSOMAL PROTEIN L3 |
Paelopatides60843 | |
Paelopatides60844 | FAS-ASSOCIATING DEATH DOMAIN-CONTAINING PROTEIN FADD |
Paelopatides60845 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
Paelopatides60846 | |
Paelopatides60847 |