The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Paelopatides sp. Yap | Echinodermata | Paelopatides sp. Yap | Deep sea | 6,633 | Yap Trench at 8°1′22"N; 137°50′41"E | - |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| - | 3.7Gb | Contig | 2020 | - | Fujian Agriculture and Forestry University | PRJCA003789 | 89.40% | 57,522 |
| Title | Journal | Pubmed ID |
|---|---|---|
| The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environments | iScience | 36444293 |
| Gene ID | Description |
|---|---|
| Paelopatides59815 | OXIDOREDUCTASES |
| Paelopatides59816 | OXIDOREDUCTASES |
| Paelopatides59817 | NEUROPEPTIDE RECEPTOR-RELATED G-PROTEIN COUPLED RECEPTOR |
| Paelopatides59818 | ULP_PROTEASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides59819 | |
| Paelopatides59820 | |
| Paelopatides59821 | |
| Paelopatides59822 | |
| Paelopatides59823 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides59824 | |
| Paelopatides59825 | |
| Paelopatides59826 | EPM2A-INTERACTING PROTEIN 1 |
| Paelopatides59830 | |
| Paelopatides59831 | FIBRINOGEN/TENASCIN/ANGIOPOEITIN |
| Paelopatides59832 | ANKYRIN REPEAT AND MYND DOMAIN-CONTAINING PROTEIN 2 |
| Paelopatides59833 | |
| Paelopatides59834 | ADHESION G PROTEIN-COUPLED RECEPTOR G7 |
| Paelopatides59835 | GEO11136P1-RELATED |
| Paelopatides59836 | UDP-GLUCOSE GLYCOPROTEIN:GLUCOSYLTRANSFERASE |
| Paelopatides59837 | MAP/MICROTUBULE AFFINITY-REGULATING KINASE |
| Paelopatides59838 | ACETYLCHOLINESTERASE |
| Paelopatides59839 | ATILLA, ISOFORM B-RELATED-RELATED |
| Paelopatides59840 | - |
| Paelopatides59841 | |
| Paelopatides59842 | GTP-BINDING |
| Paelopatides59843 | |
| Paelopatides59844 | TYROSINE-PROTEIN KINASE RECEPTOR |
| Paelopatides59845 | PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4 |
| Paelopatides59846 | PULMONARY SURFACTANT-ASSOCIATED PROTEIN A |
| Paelopatides59847 | ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides59848 | LOW-DENSITY LIPOPROTEIN RECEPTOR-RELATED PROTEIN 2-RELATED |
| Paelopatides59849 | TRANSPOSON |
| Paelopatides59850 | TYROSINE-PROTEIN KINASE RECEPTOR |
| Paelopatides59851 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
| Paelopatides59852 | LEUCINE-RICH REPEAT AND IQ DOMAIN-CONTAINING PROTEIN 3 |
| Paelopatides59853 | 30S 40S RIBOSOMAL PROTEIN |
| Paelopatides59854 | ATPASE N2B |
| Paelopatides59855 | ATPASE N2B |
| Paelopatides59856 | POL PROTEIN |
| Paelopatides59857 | ENDONUCLEASE-RELATED |
| Paelopatides59858 | HYR DOMAIN-CONTAINING PROTEIN |
| Paelopatides59859 | - |
| Paelopatides59860 | PROTEIN CBG26694 |
| Paelopatides59861 | PROTEIN CBG26694 |
| Paelopatides59862 | |
| Paelopatides59863 | L1 TRANSPOSABLE ELEMENT-RELATED |
| Paelopatides59864 | |
| Paelopatides59865 | |
| Paelopatides59866 | PHOSPHOPANTETHEINE TRANSFERASE |
| Paelopatides59867 | ALPHA-GALACTOSIDASE/ALPHA-N-ACETYLGALACTOSAMINIDASE |
