The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Paelopatides sp. Yap | Echinodermata | Paelopatides sp. Yap | Deep sea | 6,633 | Yap Trench at 8°1′22"N; 137°50′41"E | - |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| - | 3.7Gb | Contig | 2020 | - | Fujian Agriculture and Forestry University | PRJCA003789 | 89.40% | 57,522 |
| Title | Journal | Pubmed ID |
|---|---|---|
| The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environments | iScience | 36444293 |
| Gene ID | Description |
|---|---|
| Paelopatides59609 | CAPZ-INTERACTING PROTEIN AND RELATED PROTEINS |
| Paelopatides59610 | ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides59611 | |
| Paelopatides59612 | PLEXIN |
| Paelopatides59613 | - |
| Paelopatides59614 | PROTEIN CBG26694 |
| Paelopatides59615 | TRANSPOSON |
| Paelopatides59616 | |
| Paelopatides59617 | |
| Paelopatides59618 | BONUS, ISOFORM C-RELATED |
| Paelopatides59619 | |
| Paelopatides59620 | YTH YT521-B HOMOLOGY DOMAIN-CONTAINING |
| Paelopatides59621 | UBIQUINOL-CYTOCHROME-C REDUCTASE COMPLEX ASSEMBLY FACTOR 2 |
| Paelopatides59622 | SERINE INCORPORATOR |
| Paelopatides59623 | KRUEPPEL-LIKE TRANSCRIPTION FACTOR |
| Paelopatides59624 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides59625 | BUCENTAUR RELATED |
| Paelopatides59626 | - |
| Paelopatides59627 | MICROSOMAL DIPEPTIDASE |
| Paelopatides59628 | |
| Paelopatides59629 | UNCHARACTERIZED |
| Paelopatides59630 | G-PROTEIN COUPLED RECEPTOR |
| Paelopatides59631 | |
| Paelopatides59632 | MYND-TYPE DOMAIN-CONTAINING PROTEIN |
| Paelopatides59633 | RNA POLYMERASE II TRANSCRIPTIONAL COACTIVATOR |
| Paelopatides59634 | - |
| Paelopatides59635 | PEPTIDASE |
| Paelopatides59636 | - |
| Paelopatides59637 | INACTIVE TYROSINE-PROTEIN KINASE 7 |
| Paelopatides59638 | |
| Paelopatides59639 | |
| Paelopatides59641 | |
| Paelopatides59642 | |
| Paelopatides59643 | |
| Paelopatides59644 | UNCHARACTERIZED |
| Paelopatides59645 | |
| Paelopatides59646 | ATP-DEPENDENT PERMEASE MDL1, MITOCHONDRIAL |
| Paelopatides59647 | ATP-BINDING CASSETTE SUB-FAMILY B |
| Paelopatides59648 | ATP-DEPENDENT PERMEASE MDL1, MITOCHONDRIAL |
| Paelopatides59649 | ABC TRANSPORTER B FAMILY |
| Paelopatides59650 | ABC TRANSPORTER B FAMILY |
| Paelopatides59651 | ATP-DEPENDENT PERMEASE MDL1, MITOCHONDRIAL |
| Paelopatides59652 | ATP-BINDING CASSETTE SUB-FAMILY B |
| Paelopatides59653 | ABC TRANSPORTER B FAMILY |
| Paelopatides59654 | PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides59655 | C2H2 ZINC FINGER CGI-62-RELATED |
| Paelopatides59656 | PIEZO-TYPE MECHANOSENSITIVE ION CHANNEL HOMOLOG |
| Paelopatides59657 | RING FINGER DOMAIN-CONTAINING, POLYCOMB GROUP COMPONENT |
| Paelopatides59658 | S-ANTIGEN PROTEIN |
| Paelopatides59659 | S-ANTIGEN PROTEIN |
