The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Paelopatides sp. Yap | Echinodermata | Paelopatides sp. Yap | Deep sea | 6,633 | Yap Trench at 8°1′22"N; 137°50′41"E | - |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
- | 3.7Gb | Contig | 2020 | - | Fujian Agriculture and Forestry University | PRJCA003789 | 89.40% | 57,522 |
Title | Journal | Pubmed ID |
---|---|---|
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environments | iScience | 36444293 |
Gene ID | Description |
---|---|
Paelopatides59293 | CYTOCHROME C OXIDASE POLYPEPTIDE VIC-2 |
Paelopatides59294 | CYTOCHROME C OXIDASE POLYPEPTIDE VIC-2 |
Paelopatides59295 | CYTOCHROME C OXIDASE POLYPEPTIDE VIC-2 |
Paelopatides59296 | ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN |
Paelopatides59297 | |
Paelopatides59298 | FIBRINOGEN/TENASCIN/ANGIOPOEITIN |
Paelopatides59299 | PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE |
Paelopatides59301 | ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN |
Paelopatides59302 | ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN |
Paelopatides59303 | SCP160 |
Paelopatides59304 | DUF3504 DOMAIN-CONTAINING PROTEIN |
Paelopatides59306 | PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN |
Paelopatides59307 | |
Paelopatides59308 | REVERSE TRANSCRIPTASES |
Paelopatides59309 | PROTEIN CBG26694 |
Paelopatides59310 | PROTEIN CBG26694 |
Paelopatides59311 | GLUTAMATE DECARBOXYLASE-RELATED |
Paelopatides59312 | GLUTAMATE DECARBOXYLASE-RELATED |
Paelopatides59313 | DNA ANNEALING HELICASE AND ENDONUCLEASE ZRANB3 FAMILY MEMBER |
Paelopatides59314 | DNA ANNEALING HELICASE AND ENDONUCLEASE ZRANB3 FAMILY MEMBER |
Paelopatides59316 | KELCH PROTEIN |
Paelopatides59317 | |
Paelopatides59318 | |
Paelopatides59319 | FIBRINOGEN/TENASCIN/ANGIOPOEITIN |
Paelopatides59320 | EXOSTOSIN HEPARAN SULFATE GLYCOSYLTRANSFERASE -RELATED |
Paelopatides59321 | CALCIUM BINDING PROTEINS |
Paelopatides59322 | |
Paelopatides59323 | |
Paelopatides59324 | |
Paelopatides59325 | ZINC FINGER PROTEIN 622 |
Paelopatides59326 | |
Paelopatides59327 | - |
Paelopatides59328 | |
Paelopatides59329 | PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN |
Paelopatides59330 | TRANS-GOLGI PROTEIN GMX33 |
Paelopatides59331 | GNAT FAMILY N-ACETYLTRANSFERASE |
Paelopatides59332 | LEUCOKININ RECEPTOR-RELATED |
Paelopatides59333 | TRANSPOSON TY3-I GAG-POL POLYPROTEIN |
Paelopatides59334 | |
Paelopatides59335 | |
Paelopatides59336 | ZINC KNUCKLE DOMAINCONTAINING PROTEIN-RELATED |
Paelopatides59337 | ANK_REP_REGION DOMAIN-CONTAINING PROTEIN-RELATED |
Paelopatides59338 | |
Paelopatides59339 | IP13529P |
Paelopatides59340 | |
Paelopatides59341 | FIBRINOGEN/TENASCIN/ANGIOPOEITIN |
Paelopatides59342 | FIBRINOGEN/TENASCIN/ANGIOPOEITIN |
Paelopatides59343 | ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN |
Paelopatides59344 | ZINC KNUCKLE DOMAINCONTAINING PROTEIN-RELATED |
Paelopatides59345 | PROTEIN CBG26694 |