The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Paelopatides sp. Yap | Echinodermata | Paelopatides sp. Yap | Deep sea | 6,633 | Yap Trench at 8°1′22"N; 137°50′41"E | - |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
- | 3.7Gb | Contig | 2020 | - | Fujian Agriculture and Forestry University | PRJCA003789 | 89.40% | 57,522 |
Title | Journal | Pubmed ID |
---|---|---|
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environments | iScience | 36444293 |
Gene ID | Description |
---|---|
Paelopatides58988 | PROTEIN CBG26694 |
Paelopatides58989 | PROTEIN CBG26694 |
Paelopatides58990 | PROTEIN CBG26694 |
Paelopatides58991 | PROTEIN CBG26694 |
Paelopatides58992 | PROTEIN TAG-278-RELATED |
Paelopatides58993 | PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4 |
Paelopatides58994 | PROTEIN CBG26694 |
Paelopatides58995 | SIMILAR TO HYPOTHETICAL PROTEIN |
Paelopatides58996 | ENDONUCLEASE-RELATED |
Paelopatides58997 | ARM REPEAT SUPERFAMILY PROTEIN |
Paelopatides58998 | |
Paelopatides58999 | SLIT RELATED LEUCINE-RICH REPEAT NEURONAL PROTEIN |
Paelopatides59000 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Paelopatides59001 | IG(IMMUNOGLOBULIN) AND LRR(LEUCINE RICH REPEAT) DOMAINS |
Paelopatides59002 | NEGATIVE ELONGATION FACTOR E |
Paelopatides59003 | BONUS, ISOFORM C-RELATED |
Paelopatides59004 | DUAL SPECIFICITY PROTEIN PHOSPHATASE |
Paelopatides59005 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
Paelopatides59006 | ASPARTYL PROTEASE DDI-RELATED |
Paelopatides59007 | ENDONUCLEASE-RELATED |
Paelopatides59008 | |
Paelopatides59009 | DNA2/NAM7 HELICASE FAMILY MEMBER |
Paelopatides59010 | |
Paelopatides59011 | BONUS, ISOFORM C-RELATED |
Paelopatides59012 | ALPHA-2,3-SIALYLTRANSFERASE ST3GAL I ISOFORM X1 |
Paelopatides59013 | ALPHA-2,3-SIALYLTRANSFERASE ST3GAL I ISOFORM X1 |
Paelopatides59014 | PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN |
Paelopatides59015 | DYNEIN HEAVY CHAIN 1, AXONEMAL-LIKE PROTEIN |
Paelopatides59016 | DYNEIN HEAVY CHAIN 1, AXONEMAL-LIKE PROTEIN |
Paelopatides59017 | |
Paelopatides59018 | |
Paelopatides59019 | |
Paelopatides59020 | HYPOXIA-INDUCIBLE FACTOR 1 ALPHA INHIBITOR-RELATED |
Paelopatides59021 | CONNECTOR ENCHANCER OF KINASE SUPPRESSOR OF RAS |
Paelopatides59022 | |
Paelopatides59023 | |
Paelopatides59025 | ARGININE-TRNA-PROTEIN TRANSFERASE 1 |
Paelopatides59026 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Paelopatides59027 | PROTEIN CBG26694 |
Paelopatides59028 | RUNT RELATED |
Paelopatides59029 | GEO11136P1-RELATED |
Paelopatides59030 | ANKYRIN REPEAT AND BTB/POZ DOMAIN-CONTAINING |
Paelopatides59031 | |
Paelopatides59032 | |
Paelopatides59033 | NETRIN RECEPTOR UNC5 |
Paelopatides59034 | IP13529P |
Paelopatides59035 | |
Paelopatides59036 | PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN |
Paelopatides59037 | UNCHARACTERIZED |
Paelopatides59038 | CXC2 DOMAIN-CONTAINING PROTEIN |