The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Paelopatides sp. Yap | Echinodermata | Paelopatides sp. Yap | Deep sea | 6,633 | Yap Trench at 8°1′22"N; 137°50′41"E | - |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
- | 3.7Gb | Contig | 2020 | - | Fujian Agriculture and Forestry University | PRJCA003789 | 89.40% | 57,522 |
Title | Journal | Pubmed ID |
---|---|---|
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environments | iScience | 36444293 |
Gene ID | Description |
---|---|
Paelopatides58732 | ENZYMATIC POLYPROTEIN-RELATED |
Paelopatides58733 | POL PROTEIN |
Paelopatides58734 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
Paelopatides58735 | FIBRINOGEN/TENASCIN/ANGIOPOEITIN |
Paelopatides58738 | IP13529P |
Paelopatides58739 | F5/8 TYPE C DOMAIN-CONTAINING PROTEIN-RELATED |
Paelopatides58740 | |
Paelopatides58741 | BETA TRANSDUCIN-RELATED PROTEIN |
Paelopatides58742 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Paelopatides58743 | PROTEIN CBG26694 |
Paelopatides58744 | CASEIN KINASE-RELATED |
Paelopatides58745 | |
Paelopatides58746 | UNCHARACTERIZED |
Paelopatides58747 | UNCHARACTERIZED |
Paelopatides58748 | THYROID RECEPTOR INTERACTING PROTEIN RELATED |
Paelopatides58749 | |
Paelopatides58750 | |
Paelopatides58751 | DUF3504 DOMAIN-CONTAINING PROTEIN |
Paelopatides58752 | |
Paelopatides58753 | |
Paelopatides58754 | VERY KIND PROTEIN |
Paelopatides58755 | PUTATIVE-RELATED |
Paelopatides58756 | DNA REPAIR DEAD HELICASE RAD3/XP-D SUBFAMILY MEMBER |
Paelopatides58757 | DILUTE DOMAIN-CONTAINING PROTEIN YPR089W |
Paelopatides58758 | CAMP-REGULATED PHOSPHOPROTEIN 21 RELATED R3H DOMAIN CONTAINING PROTEIN |
Paelopatides58759 | CAMP-REGULATED PHOSPHOPROTEIN 21 RELATED R3H DOMAIN CONTAINING PROTEIN |
Paelopatides58760 | THYROTROPH EMBRYONIC FACTOR RELATED |
Paelopatides58761 | TRANSPOSON |
Paelopatides58762 | |
Paelopatides58763 | AMPHIPHYSIN |
Paelopatides58764 | AMPHIPHYSIN |
Paelopatides58765 | |
Paelopatides58766 | TYROSINE-PROTEIN KINASE |
Paelopatides58767 | NETRIN RECEPTOR UNC5 |
Paelopatides58768 | TYROSINE-PROTEIN KINASE |
Paelopatides58769 | PROTEIN KINASE DOMAIN-CONTAINING PROTEIN |
Paelopatides58770 | DNA POLYMERASE EPSILON SUBUNIT 3 |
Paelopatides58773 | ANK_REP_REGION DOMAIN-CONTAINING PROTEIN-RELATED |
Paelopatides58774 | PROTEIN CBG26694 |
Paelopatides58775 | PROTEIN CBG26694 |
Paelopatides58776 | 40S RIBOSOMAL PROTEIN S3A |
Paelopatides58777 | FIBRINOGEN/TENASCIN/ANGIOPOEITIN |
Paelopatides58778 | |
Paelopatides58779 | CHARGED MULTIVESICULAR BODY PROTEIN |
Paelopatides58780 | - |
Paelopatides58781 | PROTEIN CBG26694 |
Paelopatides58782 | - |
Paelopatides58783 | |
Paelopatides58784 | |
Paelopatides58785 | PROTEIN CBG26694 |