The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Paelopatides sp. Yap | Echinodermata | Paelopatides sp. Yap | Deep sea | 6,633 | Yap Trench at 8°1′22"N; 137°50′41"E | - |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
- | 3.7Gb | Contig | 2020 | - | Fujian Agriculture and Forestry University | PRJCA003789 | 89.40% | 57,522 |
Title | Journal | Pubmed ID |
---|---|---|
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environments | iScience | 36444293 |
Gene ID | Description |
---|---|
Paelopatides58786 | PROTEIN CBG26694 |
Paelopatides58787 | - |
Paelopatides58788 | 39S RIBOSOMAL PROTEIN L36, MITOCHONDRIAL |
Paelopatides58789 | NADH-UBIQUINONE OXIDOREDUCTASE 13 KD-A SUBUNIT |
Paelopatides58790 | TRANSCRIPTASE, PUTATIVE-RELATED-RELATED |
Paelopatides58791 | EPM2A-INTERACTING PROTEIN 1 |
Paelopatides58792 | KIF1-BINDING PROTEIN |
Paelopatides58793 | MYOSIN LIGHT CHAIN 1, 3 |
Paelopatides58794 | |
Paelopatides58795 | ACYL-COA-BINDING PROTEIN, ACBP |
Paelopatides58796 | |
Paelopatides58797 | |
Paelopatides58798 | SOLUTE CARRIER FAMILY 22 MEMBER |
Paelopatides58799 | ASTEROID PROTEIN |
Paelopatides58800 | ADP RIBOSYLATION FACTOR-RELATED |
Paelopatides58801 | |
Paelopatides58802 | TRANSPOSASE, PUTATIVE-RELATED |
Paelopatides58803 | ARYLSULFATASE |
Paelopatides58804 | ARYLSULFATASE |
Paelopatides58805 | ANTI-SILENCING PROTEIN 1 |
Paelopatides58806 | DYNEIN INTERMEDIATE CHAIN |
Paelopatides58807 | DYNEIN INTERMEDIATE CHAIN |
Paelopatides58808 | NETRIN RECEPTOR UNC5 |
Paelopatides58809 | |
Paelopatides58810 | PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN |
Paelopatides58811 | |
Paelopatides58812 | |
Paelopatides58813 | VACUOLAR PROTEIN SORTING VPS41 |
Paelopatides58814 | ZINC FINGER FYVE DOMAIN-CONTAINING PROTEIN 26 |
Paelopatides58815 | ACYLTRANSFERASE |
Paelopatides58816 | TRANSLATION INITIATION FACTOR-RELATED |
Paelopatides58817 | 39S RIBOSOMAL PROTEIN L14, MITOCHONDRIAL |
Paelopatides58818 | YIP1 INTERACTING FACTOR HOMOLOG YIF1 PROTEIN |
Paelopatides58819 | FINGER PUTATIVE TRANSCRIPTION FACTOR FAMILY-RELATED |
Paelopatides58820 | SAPOSIN-RELATED |
Paelopatides58821 | SAPOSIN-RELATED |
Paelopatides58822 | CCR4 NOT-RELATED |
Paelopatides58823 | 52 KDA REPRESSOR OF THE INHIBITOR OF THE PROTEIN KINASE-LIKE PROTEIN-RELATED |
Paelopatides58824 | LEUCOKININ RECEPTOR-RELATED |
Paelopatides58825 | ZINC KNUCKLE DOMAINCONTAINING PROTEIN-RELATED |
Paelopatides58826 | UPF0547 PROTEIN C16ORF87 |
Paelopatides58827 | FI04643P-RELATED |
Paelopatides58828 | PHD-TYPE DOMAIN-CONTAINING PROTEIN |
Paelopatides58829 | PHD-TYPE DOMAIN-CONTAINING PROTEIN |
Paelopatides58830 | PHD-TYPE DOMAIN-CONTAINING PROTEIN |
Paelopatides58831 | RETROTRANSPOSON |
Paelopatides58832 | FI04643P-RELATED |
Paelopatides58833 | CAS SCAFFOLDING PROTEIN |
Paelopatides58834 | CAS SCAFFOLDING PROTEIN |
Paelopatides58835 |