The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Paelopatides sp. Yap | Echinodermata | Paelopatides sp. Yap | Deep sea | 6,633 | Yap Trench at 8°1′22"N; 137°50′41"E | - |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
- | 3.7Gb | Contig | 2020 | - | Fujian Agriculture and Forestry University | PRJCA003789 | 89.40% | 57,522 |
Title | Journal | Pubmed ID |
---|---|---|
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environments | iScience | 36444293 |
Gene ID | Description |
---|---|
Paelopatides58471 | IG(IMMUNOGLOBULIN) AND LRR(LEUCINE RICH REPEAT) DOMAINS |
Paelopatides58472 | |
Paelopatides58473 | INTEGRASE CATALYTIC DOMAIN-CONTAINING PROTEIN-RELATED |
Paelopatides58474 | ULP_PROTEASE DOMAIN-CONTAINING PROTEIN |
Paelopatides58475 | ULP_PROTEASE DOMAIN-CONTAINING PROTEIN |
Paelopatides58476 | |
Paelopatides58477 | PROTEIN CBG26694 |
Paelopatides58478 | |
Paelopatides58479 | |
Paelopatides58480 | |
Paelopatides58481 | ATP-DEPENDENT DNA HELICASE |
Paelopatides58482 | PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4 |
Paelopatides58483 | PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4 |
Paelopatides58484 | |
Paelopatides58485 | - |
Paelopatides58486 | |
Paelopatides58487 | |
Paelopatides58488 | ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN |
Paelopatides58489 | EXPRESSED PROTEIN |
Paelopatides58490 | |
Paelopatides58491 | RETROTRANSPOSON |
Paelopatides58492 | TRANSPOSON |
Paelopatides58493 | GTPASE, IMAP FAMILY MEMBER-RELATED |
Paelopatides58494 | PROTEIN QUA-1-RELATED |
Paelopatides58495 | GTPASE, IMAP FAMILY MEMBER-RELATED |
Paelopatides58496 | |
Paelopatides58497 | PROTEIN CBG26694 |
Paelopatides58498 | NACHT DOMAIN-CONTAINING PROTEIN |
Paelopatides58499 | ACETYLCHOLINESTERASE |
Paelopatides58500 | SOLUTE CARRIER FAMILY 22 MEMBER |
Paelopatides58501 | |
Paelopatides58502 | |
Paelopatides58503 | |
Paelopatides58504 | |
Paelopatides58505 | ULP_PROTEASE DOMAIN-CONTAINING PROTEIN |
Paelopatides58506 | PHOSPHOSERINE PHOSPHATASE |
Paelopatides58507 | PHOSPHOLIPASE B-RELATED |
Paelopatides58508 | PHOSPHOLIPASE B-RELATED |
Paelopatides58511 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Paelopatides58512 | BUCENTAUR RELATED |
Paelopatides58513 | ORGANIC ANION TRANSPORTER |
Paelopatides58514 | |
Paelopatides58515 | UNCHARACTERIZED |
Paelopatides58516 | DIACYLGLYCEROL KINASE |
Paelopatides58517 | |
Paelopatides58518 | ANK_REP_REGION DOMAIN-CONTAINING PROTEIN |
Paelopatides58519 | SODIUM/CHLORIDE DEPENDENT TRANSPORTER |
Paelopatides58520 | S PHASE CYCLIN A-ASSOCIATED PROTEIN IN THE ENDOPLASMIC RETICULUM |
Paelopatides58521 | |
Paelopatides58522 | BUCENTAUR RELATED |