The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Paelopatides sp. Yap | Echinodermata | Paelopatides sp. Yap | Deep sea | 6,633 | Yap Trench at 8°1′22"N; 137°50′41"E | - |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
- | 3.7Gb | Contig | 2020 | - | Fujian Agriculture and Forestry University | PRJCA003789 | 89.40% | 57,522 |
Title | Journal | Pubmed ID |
---|---|---|
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environments | iScience | 36444293 |
Gene ID | Description |
---|---|
Paelopatides58367 | PROTEIN CBG26694 |
Paelopatides58368 | ZINC KNUCKLE DOMAINCONTAINING PROTEIN-RELATED |
Paelopatides58369 | ZINC KNUCKLE DOMAINCONTAINING PROTEIN-RELATED |
Paelopatides58370 | ENZYMATIC POLYPROTEIN-RELATED |
Paelopatides58371 | ENZYMATIC POLYPROTEIN-RELATED |
Paelopatides58372 | ZINC KNUCKLE DOMAINCONTAINING PROTEIN-RELATED |
Paelopatides58373 | AMP DEAMINASE |
Paelopatides58375 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Paelopatides58376 | |
Paelopatides58377 | S-LAYER PROTEIN |
Paelopatides58378 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Paelopatides58379 | |
Paelopatides58380 | NACHT DOMAIN-CONTAINING PROTEIN |
Paelopatides58381 | NETRIN RECEPTOR UNC5 |
Paelopatides58382 | FAS-ASSOCIATING DEATH DOMAIN-CONTAINING PROTEIN FADD |
Paelopatides58383 | MYND-TYPE DOMAIN-CONTAINING PROTEIN |
Paelopatides58384 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Paelopatides58385 | VACUOLAR PROTON ATPASES |
Paelopatides58386 | LD44762P |
Paelopatides58387 | |
Paelopatides58388 | |
Paelopatides58389 | |
Paelopatides58390 | |
Paelopatides58391 | RIKEN CDNA D130052B06 GENE |
Paelopatides58392 | BAND 7 PROTEIN-RELATED |
Paelopatides58393 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Paelopatides58394 | SI:CH211-59O9.10 |
Paelopatides58395 | BAND 7 PROTEIN-RELATED |
Paelopatides58396 | RETROVIRUS-RELATED POL POLYPROTEIN FROM TRANSPOSON 412-LIKE PROTEIN-RELATED |
Paelopatides58397 | ANK_REP_REGION DOMAIN-CONTAINING PROTEIN-RELATED |
Paelopatides58398 | PROTEIN CBG26694 |
Paelopatides58399 | INTEGRASE CORE DOMAIN CONTAINING PROTEIN |
Paelopatides58400 | |
Paelopatides58401 | TORSIN |
Paelopatides58402 | |
Paelopatides58403 | FIBRINOGEN/TENASCIN/ANGIOPOEITIN |
Paelopatides58404 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
Paelopatides58405 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Paelopatides58406 | ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN |
Paelopatides58407 | EUKARYOTIC TRANSLATION INITIATION FACTOR 4 GAMMA |
Paelopatides58408 | EUKARYOTIC TRANSLATION INITIATION FACTOR 4 GAMMA |
Paelopatides58409 | |
Paelopatides58410 | GLUTAMATE DECARBOXYLASE-RELATED |
Paelopatides58411 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Paelopatides58412 | CADHERIN-23 |
Paelopatides58413 | |
Paelopatides58414 | SI:CH211-108C17.2-RELATED-RELATED |
Paelopatides58415 | |
Paelopatides58416 | ATP-DEPENDENT DNA HELICASE |
Paelopatides58417 |