The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Paelopatides sp. Yap | Echinodermata | Paelopatides sp. Yap | Deep sea | 6,633 | Yap Trench at 8°1′22"N; 137°50′41"E | - |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
- | 3.7Gb | Contig | 2020 | - | Fujian Agriculture and Forestry University | PRJCA003789 | 89.40% | 57,522 |
Title | Journal | Pubmed ID |
---|---|---|
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environments | iScience | 36444293 |
Gene ID | Description |
---|---|
Paelopatides58060 | PROTEIN CBG26694 |
Paelopatides58061 | TRANSCRIPTASE, PUTATIVE-RELATED-RELATED |
Paelopatides58062 | EGF-LIKE DOMAIN-CONTAINING PROTEIN |
Paelopatides58063 | S -2-HYDROXY-ACID OXIDASE-RELATED |
Paelopatides58064 | |
Paelopatides58065 | FUMARYLACETOACETASE |
Paelopatides58067 | PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN |
Paelopatides58068 | |
Paelopatides58069 | EGF-LIKE DOMAIN-CONTAINING PROTEIN |
Paelopatides58070 | FIBRILLIN-RELATED |
Paelopatides58071 | EGF-LIKE DOMAIN-CONTAINING PROTEIN |
Paelopatides58072 | ZINC KNUCKLE DOMAINCONTAINING PROTEIN-RELATED |
Paelopatides58073 | UBIQUITIN CONJUGATING ENZYME 7 INTERACTING PROTEIN-RELATED |
Paelopatides58074 | |
Paelopatides58075 | ADIPOR/PROGESTIN RECEPTOR-RELATED |
Paelopatides58076 | THUMP DOMAIN CONTAINING PROTEIN 1-RELATED |
Paelopatides58077 | DESTABILASE-RELATED |
Paelopatides58078 | RETROVIRUS-RELATED POL POLYPROTEIN FROM TRANSPOSON 412-LIKE PROTEIN-RELATED |
Paelopatides58079 | MIR DOMAIN-CONTAINING PROTEIN |
Paelopatides58080 | PROTEASE FAMILY M14 CARBOXYPEPTIDASE A,B |
Paelopatides58081 | PROTEASE FAMILY M14 CARBOXYPEPTIDASE A,B |
Paelopatides58082 | PROTEASE FAMILY M14 CARBOXYPEPTIDASE A,B |
Paelopatides58083 | PROTEIN DISPATCHED-RELATED |
Paelopatides58085 | |
Paelopatides58086 | EXPORTIN 4,7-RELATED |
Paelopatides58087 | LEUCINE RICH REPEAT FAMILY PROTEIN |
Paelopatides58088 | IG-LIKE DOMAIN-CONTAINING PROTEIN |
Paelopatides58089 | EXPORTIN 4,7-RELATED |
Paelopatides58090 | PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN |
Paelopatides58091 | S -2-HYDROXY-ACID OXIDASE-RELATED |
Paelopatides58092 | ZINC FINGER DHHC DOMAIN CONTAINING PROTEIN |
Paelopatides58093 | |
Paelopatides58094 | RIBOSE-PHOSPHATE DIPHOSPHOKINASE FAMILY MEMBER |
Paelopatides58095 | |
Paelopatides58096 | SI:CH211-262H13.3-RELATED-RELATED |
Paelopatides58097 | SRCR DOMAIN-CONTAINING PROTEIN |
Paelopatides58098 | BUCENTAUR RELATED |
Paelopatides58099 | MANNOSE, PHOSPHOLIPASE, LECTIN RECEPTOR RELATED |
Paelopatides58100 | PROTEIN CBG26694 |
Paelopatides58101 | ATP-BINDING CASSETTE SUB-FAMILY C |
Paelopatides58102 | |
Paelopatides58103 | |
Paelopatides58104 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Paelopatides58105 | DNA2/NAM7 HELICASE FAMILY |
Paelopatides58106 | DNA REPAIR POLYMERASE UMUC / TRANSFERASE FAMILY MEMBER |
Paelopatides58107 | |
Paelopatides58108 | CASPASE ACTIVITY AND APOPTOSIS INHIBITOR 1 |
Paelopatides58109 | |
Paelopatides58110 | |
Paelopatides58111 | - |