The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Paelopatides sp. Yap | Echinodermata | Paelopatides sp. Yap | Deep sea | 6,633 | Yap Trench at 8°1′22"N; 137°50′41"E | - |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
- | 3.7Gb | Contig | 2020 | - | Fujian Agriculture and Forestry University | PRJCA003789 | 89.40% | 57,522 |
Title | Journal | Pubmed ID |
---|---|---|
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environments | iScience | 36444293 |
Gene ID | Description |
---|---|
Paelopatides57847 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Paelopatides57848 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Paelopatides57849 | F5/8 TYPE C DOMAIN-CONTAINING PROTEIN-RELATED |
Paelopatides57850 | PROLYL ENDOPEPTIDASE |
Paelopatides57851 | INSULIN RECEPTOR SUBSTRATE |
Paelopatides57852 | ENDONUCLEASE-RELATED |
Paelopatides57853 | ENZYMATIC POLYPROTEIN-RELATED |
Paelopatides57854 | ZINC FINGER, C3HC4 TYPE (RING FINGER) FAMILY PROTEIN |
Paelopatides57855 | ZINC FINGER, C3HC4 TYPE (RING FINGER) FAMILY PROTEIN |
Paelopatides57856 | SACSIN |
Paelopatides57857 | ZINC FINGER, C3HC4 TYPE (RING FINGER) FAMILY PROTEIN |
Paelopatides57858 | GENERAL TRANSCRIPTION FACTOR 3C POLYPEPTIDE 1 |
Paelopatides57859 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
Paelopatides57860 | PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4 |
Paelopatides57861 | CONSERVED OLIGOMERIC GOLGI COMPLEX COMPONENT 5 |
Paelopatides57862 | CONSERVED OLIGOMERIC GOLGI COMPLEX COMPONENT 5 |
Paelopatides57863 | |
Paelopatides57864 | UNCHARACTERIZED |
Paelopatides57865 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
Paelopatides57866 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
Paelopatides57867 | ZINC KNUCKLE DOMAINCONTAINING PROTEIN-RELATED |
Paelopatides57868 | RIKEN CDNA 4933430I17 GENE |
Paelopatides57869 | ALLOGRAFT INFLAMMATORY FACTOR-1 |
Paelopatides57870 | NEUROTRANSMITTER GATED ION CHANNEL |
Paelopatides57871 | |
Paelopatides57872 | |
Paelopatides57873 | SPLICING FACTOR 3B, SUBUNIT 1-RELATED |
Paelopatides57874 | SPERM PROTEIN HOMOLOG |
Paelopatides57875 | CALPAIN, SMALL SUBUNIT 1 A-RELATED |
Paelopatides57876 | |
Paelopatides57877 | |
Paelopatides57878 | PUTATIVE-RELATED |
Paelopatides57879 | - |
Paelopatides57880 | |
Paelopatides57881 | ZINC FINGER PROTEIN |
Paelopatides57882 | UNCHARACTERIZED |
Paelopatides57883 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
Paelopatides57884 | FIBRINOGEN/TENASCIN/ANGIOPOEITIN |
Paelopatides57885 | MATRIX PROTEIN, PUTATIVE-RELATED |
Paelopatides57886 | MANNOSE, PHOSPHOLIPASE, LECTIN RECEPTOR RELATED |
Paelopatides57887 | TRANSPOSON TY3-I GAG-POL POLYPROTEIN |
Paelopatides57888 | ADAMTS A DISINTEGRIN AND METALLOPROTEASE WITH THROMBOSPONDIN MOTIFS PROTEASE |
Paelopatides57889 | ADAM A DISINTEGRIN AND METALLOPROTEASE DOMAIN |
Paelopatides57890 | 41-2 PROTEIN ANTIGEN-RELATED |
Paelopatides57891 | |
Paelopatides57892 | 41-2 PROTEIN ANTIGEN-RELATED |
Paelopatides57893 | |
Paelopatides57894 | ENZYMATIC POLYPROTEIN-RELATED |
Paelopatides57895 | ZINC KNUCKLE DOMAINCONTAINING PROTEIN-RELATED |
Paelopatides57896 | ZINC KNUCKLE DOMAINCONTAINING PROTEIN-RELATED |