About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40%57,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides57691RNA POLYMERASE II HOLOENZYME COMPONENT SRB7
Paelopatides57692GEO07735P1-RELATED-RELATED
Paelopatides57693CXC DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides57694MULTIPLE EPIDERMAL GROWTH FACTOR-LIKE DOMAINS PROTEIN
Paelopatides57695FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides57696UBIQUITIN-PROTEIN LIGASE E3C
Paelopatides57697REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides57698
Paelopatides57700
Paelopatides57701
Paelopatides57702COLLAGEN ALPHA
Paelopatides57703POL PROTEIN
Paelopatides57704F5/8 TYPE C DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides57705REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides57706REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides57707FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides57708PHOSPHATIDYLINOSITOL GLYCAN, CLASS C
Paelopatides57709POL PROTEIN
Paelopatides57710ENZYMATIC POLYPROTEIN-RELATED
Paelopatides57711INACTIVE TYROSINE-PROTEIN KINASE 7
Paelopatides57712MULTIPLE EPIDERMAL GROWTH FACTOR-LIKE DOMAINS PROTEIN
Paelopatides57713
Paelopatides57714
Paelopatides57715
Paelopatides57716REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides57717
Paelopatides57718-
Paelopatides57719ALANINE--GLYOXYLATE AMINOTRANSFERASE 2, MITOCHONDRIAL
Paelopatides57720ABSCISSION/NOCUT CHECKPOINT REGULATOR
Paelopatides57721PALMITOYLTRANSFERASE ZDHHC16
Paelopatides57722IMPORTIN BETA
Paelopatides57723
Paelopatides57724PROTEIN DISPATCHED-RELATED
Paelopatides57725
Paelopatides57726
Paelopatides57727
Paelopatides57728PROTEASE M1 ZINC METALLOPROTEASE
Paelopatides57729PROTEASE M1 ZINC METALLOPROTEASE
Paelopatides57730
Paelopatides57731
Paelopatides57732
Paelopatides57733SI:CH211-108C17.2-RELATED-RELATED
Paelopatides57736JNK1/MAPK8-ASSOCIATED MEMBRANE PROTEIN
Paelopatides57737INHIBITOR OF APOPTOSIS
Paelopatides57738INHIBITOR OF APOPTOSIS
Paelopatides57739DNA REPAIR/TRANSCRIPTION PROTEIN MET18/MMS19
Paelopatides57740
Paelopatides57741
Paelopatides57742
Paelopatides57743
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