The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Paelopatides sp. Yap | Echinodermata | Paelopatides sp. Yap | Deep sea | 6,633 | Yap Trench at 8°1′22"N; 137°50′41"E | - |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
- | 3.7Gb | Contig | 2020 | - | Fujian Agriculture and Forestry University | PRJCA003789 | 89.40% | 57,522 |
Title | Journal | Pubmed ID |
---|---|---|
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environments | iScience | 36444293 |
Gene ID | Description |
---|---|
Paelopatides57374 | UNCHARACTERIZED |
Paelopatides57375 | SURFEIT LOCUS PROTEIN 2 |
Paelopatides57376 | NEUROPATHY TARGET ESTERASE/SWISS CHEESE D.MELANOGASTER |
Paelopatides57377 | MOLTING PROTEIN MLT-4 |
Paelopatides57379 | PROTEIN CBG26694 |
Paelopatides57380 | |
Paelopatides57381 | PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4 |
Paelopatides57382 | |
Paelopatides57383 | PROTEIN C9ORF135 |
Paelopatides57384 | PROTEIN C9ORF135 |
Paelopatides57385 | SYNTAXIN |
Paelopatides57386 | PROLACTIN REGULATORY ELEMENT BINDING PROTEIN |
Paelopatides57387 | PROLACTIN REGULATORY ELEMENT BINDING PROTEIN |
Paelopatides57388 | GUANYLYL CYCLASE |
Paelopatides57389 | GUANYLYL CYCLASE |
Paelopatides57390 | SERINE PEPTIDASE S9 FAMILY MEMBER |
Paelopatides57391 | |
Paelopatides57392 | SERINE/THREONINE-PROTEIN KINASE PIM |
Paelopatides57393 | FI04643P-RELATED |
Paelopatides57394 | |
Paelopatides57395 | EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT 7 |
Paelopatides57396 | EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT 7 |
Paelopatides57397 | SLIT RELATED LEUCINE-RICH REPEAT NEURONAL PROTEIN |
Paelopatides57398 | LEUCINE-RICH REPEAT-CONTAINING PROTEIN 19 LRRC19 FAMILY MEMBER |
Paelopatides57399 | ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN |
Paelopatides57400 | REPLICATION FACTOR C / DNA POLYMERASE III GAMMA-TAU SUBUNIT |
Paelopatides57401 | PCNA-INTERACTING PARTNER |
Paelopatides57402 | |
Paelopatides57403 | SODIUM-COUPLED MONOCARBOXYLATE TRANSPORTER |
Paelopatides57404 | XANTHINE DEHYDROGENASE |
Paelopatides57405 | - |
Paelopatides57406 | XANTHINE DEHYDROGENASE |
Paelopatides57407 | MITOCHONDRIAL 28S RIBOSOMAL PROTEIN S10 |
Paelopatides57408 | MACROGLOBULIN / COMPLEMENT |
Paelopatides57409 | |
Paelopatides57410 | RNA CLEAVAGE STIMULATION FACTOR |
Paelopatides57411 | |
Paelopatides57412 | |
Paelopatides57413 | KICSTOR COMPLEX PROTEIN SZT2 |
Paelopatides57414 | |
Paelopatides57415 | |
Paelopatides57416 | F5/8 TYPE C DOMAIN-CONTAINING PROTEIN-RELATED |
Paelopatides57417 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Paelopatides57418 | POLYCYSTIN-1 |
Paelopatides57419 | |
Paelopatides57420 | POLYCYSTIN-1 |
Paelopatides57421 | MALONYL-COA ACP TRANSACYLASE, ACP-BINDING |
Paelopatides57422 | ANION EXCHANGE PROTEIN |
Paelopatides57423 | ANION EXCHANGE PROTEIN |
Paelopatides57424 |