The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Paelopatides sp. Yap | Echinodermata | Paelopatides sp. Yap | Deep sea | 6,633 | Yap Trench at 8°1′22"N; 137°50′41"E | - |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
- | 3.7Gb | Contig | 2020 | - | Fujian Agriculture and Forestry University | PRJCA003789 | 89.40% | 57,522 |
Title | Journal | Pubmed ID |
---|---|---|
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environments | iScience | 36444293 |
Gene ID | Description |
---|---|
Paelopatides57110 | METHANETHIOL OXIDASE |
Paelopatides57111 | REVERSE TRANSCRIPTASES |
Paelopatides57112 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
Paelopatides57113 | PROTEASE FAMILY S9B,C DIPEPTIDYL-PEPTIDASE IV-RELATED |
Paelopatides57114 | ZINC FINGER PROTEIN |
Paelopatides57115 | RIBOSOMAL PROTEIN S6 KINASE |
Paelopatides57116 | SERINE/THREONINE-PROTEIN KINASE |
Paelopatides57117 | |
Paelopatides57118 | DEFECTIVE SPERMATOGENESIS PROTEIN 39 |
Paelopatides57119 | F-BOX DOMAIN CONTAINING PROTEIN, EXPRESSED |
Paelopatides57120 | EGF-LIKE DOMAIN-CONTAINING PROTEIN |
Paelopatides57122 | EXS-RELATED PROTEIN |
Paelopatides57123 | |
Paelopatides57124 | CROSSVEINLESS 2 |
Paelopatides57125 | |
Paelopatides57126 | ULP_PROTEASE DOMAIN-CONTAINING PROTEIN |
Paelopatides57127 | REVERSE TRANSCRIPTASES |
Paelopatides57128 | MYOSIN |
Paelopatides57129 | PROTEIN CBG26694 |
Paelopatides57130 | MYOSIN |
Paelopatides57131 | FIBRINOGEN/TENASCIN/ANGIOPOEITIN |
Paelopatides57132 | |
Paelopatides57133 | ANK_REP_REGION DOMAIN-CONTAINING PROTEIN-RELATED |
Paelopatides57134 | TRANSPOSON |
Paelopatides57135 | |
Paelopatides57136 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Paelopatides57137 | INTERFERON-INDUCED PROTEIN WITH TETRATRICOPEPTIDE REPEATS |
Paelopatides57138 | SOLUTE CARRIER FAMILY 2 |
Paelopatides57139 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Paelopatides57140 | |
Paelopatides57141 | ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN |
Paelopatides57142 | REVERSE TRANSCRIPTASE |
Paelopatides57143 | TRACE AMINE-ASSOCIATED RECEPTOR 19N-RELATED |
Paelopatides57144 | |
Paelopatides57145 | |
Paelopatides57146 | ACYL-COA DEHYDROGENASE |
Paelopatides57147 | MONOCARBOXYLATE TRANSPORTER |
Paelopatides57148 | HEPARAN SULFATE 2-O-SULFOTRANSFERASE |
Paelopatides57149 | AMINOPEPTIDASE |
Paelopatides57150 | |
Paelopatides57151 | AMINOPEPTIDASE |
Paelopatides57152 | CHEMOKINE C-C MOTIF RECEPTOR 1 |
Paelopatides57153 | |
Paelopatides57154 | |
Paelopatides57155 | UNCHARACTERIZED |
Paelopatides57156 | 4-HYDROXYBENZOYL-COA THIOESTERASE FAMILY MEMBER |
Paelopatides57157 | PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN |
Paelopatides57158 | 4-HYDROXYBENZOYL-COA THIOESTERASE FAMILY MEMBER |
Paelopatides57159 | PROTEIN CBG26694 |
Paelopatides57160 | PROTEIN CBG26694 |