About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40%57,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides56954ZINC KNUCKLE DOMAINCONTAINING PROTEIN-RELATED
Paelopatides56955PROTEIN CBG26694
Paelopatides56958
Paelopatides56959PROTEIN CBG26694
Paelopatides56960ADAMTS A DISINTEGRIN AND METALLOPROTEASE WITH THROMBOSPONDIN MOTIFS PROTEASE
Paelopatides56961N-ACETYLGLUCOSAMINYL-PHOSPHATIDYLINOSITOL BIOSYNTHETIC PROTEIN
Paelopatides56962-
Paelopatides56963PROTEASE M1 ZINC METALLOPROTEASE
Paelopatides56964PROTEASE M1 ZINC METALLOPROTEASE
Paelopatides56965GALACTOSE-3-O-SULFOTRANSFERASE
Paelopatides56966
Paelopatides56967CYSTEINE-RICH MOTOR NEURON 1 PROTEIN
Paelopatides56968
Paelopatides56969F5/8 TYPE C DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides56970NXPE FAMILY MEMBER
Paelopatides56971GALACTOSE-3-O-SULFOTRANSFERASE
Paelopatides56972AGAP005574-PA
Paelopatides56973AMINO ACID TRANSPORTER
Paelopatides56974SOLUTE CARRIER FAMILY 12, CATION COTRANSPORTERS
Paelopatides56975FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides56976FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides56977SWIM-TYPE DOMAIN-CONTAINING PROTEIN
Paelopatides56978
Paelopatides56979REVERSE TRANSCRIPTASE
Paelopatides56980UNCHARACTERIZED
Paelopatides56981
Paelopatides56982ADAMTS A DISINTEGRIN AND METALLOPROTEASE WITH THROMBOSPONDIN MOTIFS PROTEASE
Paelopatides56983EPM2A-INTERACTING PROTEIN 1
Paelopatides56984
Paelopatides56985ENDONUCLEASE-RELATED
Paelopatides56986INTERFERON-INDUCED PROTEIN WITH TETRATRICOPEPTIDE REPEATS
Paelopatides56987ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides56988
Paelopatides56989GTPASE, IMAP FAMILY MEMBER-RELATED
Paelopatides56990ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides56991
Paelopatides56992KREMEN PROTEIN
Paelopatides56993FAS-ASSOCIATED PROTEIN
Paelopatides56994CREG1 PROTEIN
Paelopatides56995PHD-TYPE DOMAIN-CONTAINING PROTEIN
Paelopatides56996RETROTRANSPOSON
Paelopatides56997
Paelopatides56998
Paelopatides56999
Paelopatides57000
Paelopatides57001
Paelopatides57002REVERSE TRANSCRIPTASES
Paelopatides57003
Paelopatides57004ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides57005TORSIN
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