The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Paelopatides sp. Yap | Echinodermata | Paelopatides sp. Yap | Deep sea | 6,633 | Yap Trench at 8°1′22"N; 137°50′41"E | - |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
- | 3.7Gb | Contig | 2020 | - | Fujian Agriculture and Forestry University | PRJCA003789 | 89.40% | 57,522 |
Title | Journal | Pubmed ID |
---|---|---|
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environments | iScience | 36444293 |
Gene ID | Description |
---|---|
Paelopatides56954 | ZINC KNUCKLE DOMAINCONTAINING PROTEIN-RELATED |
Paelopatides56955 | PROTEIN CBG26694 |
Paelopatides56958 | |
Paelopatides56959 | PROTEIN CBG26694 |
Paelopatides56960 | ADAMTS A DISINTEGRIN AND METALLOPROTEASE WITH THROMBOSPONDIN MOTIFS PROTEASE |
Paelopatides56961 | N-ACETYLGLUCOSAMINYL-PHOSPHATIDYLINOSITOL BIOSYNTHETIC PROTEIN |
Paelopatides56962 | - |
Paelopatides56963 | PROTEASE M1 ZINC METALLOPROTEASE |
Paelopatides56964 | PROTEASE M1 ZINC METALLOPROTEASE |
Paelopatides56965 | GALACTOSE-3-O-SULFOTRANSFERASE |
Paelopatides56966 | |
Paelopatides56967 | CYSTEINE-RICH MOTOR NEURON 1 PROTEIN |
Paelopatides56968 | |
Paelopatides56969 | F5/8 TYPE C DOMAIN-CONTAINING PROTEIN-RELATED |
Paelopatides56970 | NXPE FAMILY MEMBER |
Paelopatides56971 | GALACTOSE-3-O-SULFOTRANSFERASE |
Paelopatides56972 | AGAP005574-PA |
Paelopatides56973 | AMINO ACID TRANSPORTER |
Paelopatides56974 | SOLUTE CARRIER FAMILY 12, CATION COTRANSPORTERS |
Paelopatides56975 | FIBRINOGEN/TENASCIN/ANGIOPOEITIN |
Paelopatides56976 | FIBRINOGEN/TENASCIN/ANGIOPOEITIN |
Paelopatides56977 | SWIM-TYPE DOMAIN-CONTAINING PROTEIN |
Paelopatides56978 | |
Paelopatides56979 | REVERSE TRANSCRIPTASE |
Paelopatides56980 | UNCHARACTERIZED |
Paelopatides56981 | |
Paelopatides56982 | ADAMTS A DISINTEGRIN AND METALLOPROTEASE WITH THROMBOSPONDIN MOTIFS PROTEASE |
Paelopatides56983 | EPM2A-INTERACTING PROTEIN 1 |
Paelopatides56984 | |
Paelopatides56985 | ENDONUCLEASE-RELATED |
Paelopatides56986 | INTERFERON-INDUCED PROTEIN WITH TETRATRICOPEPTIDE REPEATS |
Paelopatides56987 | ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN |
Paelopatides56988 | |
Paelopatides56989 | GTPASE, IMAP FAMILY MEMBER-RELATED |
Paelopatides56990 | ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN |
Paelopatides56991 | |
Paelopatides56992 | KREMEN PROTEIN |
Paelopatides56993 | FAS-ASSOCIATED PROTEIN |
Paelopatides56994 | CREG1 PROTEIN |
Paelopatides56995 | PHD-TYPE DOMAIN-CONTAINING PROTEIN |
Paelopatides56996 | RETROTRANSPOSON |
Paelopatides56997 | |
Paelopatides56998 | |
Paelopatides56999 | |
Paelopatides57000 | |
Paelopatides57001 | |
Paelopatides57002 | REVERSE TRANSCRIPTASES |
Paelopatides57003 | |
Paelopatides57004 | ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN |
Paelopatides57005 | TORSIN |