The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Paelopatides sp. Yap | Echinodermata | Paelopatides sp. Yap | Deep sea | 6,633 | Yap Trench at 8°1′22"N; 137°50′41"E | - |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| - | 3.7Gb | Contig | 2020 | - | Fujian Agriculture and Forestry University | PRJCA003789 | 89.40% | 57,522 |
| Title | Journal | Pubmed ID |
|---|---|---|
| The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environments | iScience | 36444293 |
| Gene ID | Description |
|---|---|
| Paelopatides56698 | PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4 |
| Paelopatides56699 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides56700 | |
| Paelopatides56701 | |
| Paelopatides56702 | IP13529P |
| Paelopatides56703 | NXPE FAMILY MEMBER |
| Paelopatides56704 | |
| Paelopatides56705 | TRANSPOSON TY3-I GAG-POL POLYPROTEIN |
| Paelopatides56706 | |
| Paelopatides56707 | PROTEIN CBG26694 |
| Paelopatides56708 | |
| Paelopatides56709 | DNA REPAIR PROTEIN REV1 |
| Paelopatides56710 | |
| Paelopatides56711 | DNA REPAIR PROTEIN REV1 |
| Paelopatides56712 | DNA REPAIR PROTEIN REV1 |
| Paelopatides56713 | |
| Paelopatides56714 | DNA REPAIR PROTEIN REV1 |
| Paelopatides56715 | DNA REPAIR PROTEIN REV1 |
| Paelopatides56716 | PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4 |
| Paelopatides56717 | B2 BRADYKININ RECEPTOR/ANGIOTENSIN II RECEPTOR |
| Paelopatides56718 | 4-NITROPHENYLPHOSPHATASE-RELATED |
| Paelopatides56719 | GTPASE, IMAP FAMILY MEMBER-RELATED |
| Paelopatides56720 | KICSTOR COMPLEX PROTEIN SZT2 |
| Paelopatides56721 | |
| Paelopatides56722 | - |
| Paelopatides56723 | |
| Paelopatides56724 | N-ACETYLGLUCOSAMINE-6-SULFATASE FAMILY MEMBER |
| Paelopatides56725 | - |
| Paelopatides56726 | - |
| Paelopatides56727 | - |
| Paelopatides56728 | SRCR DOMAIN-CONTAINING PROTEIN |
| Paelopatides56729 | PROTEIN CBG26694 |
| Paelopatides56730 | CODANIN-1 |
| Paelopatides56731 | APOPTOSIS REGULATORY PROTEIN SIVA |
| Paelopatides56732 | |
| Paelopatides56733 | MOLYBDOPTERIN COFACTOR SYNTHESIS PROTEIN A |
| Paelopatides56734 | ROLLING PEBBLES, ISOFORM B |
| Paelopatides56735 | ROLLING PEBBLES, ISOFORM B |
| Paelopatides56736 | REVERSE TRANSCRIPTASES |
| Paelopatides56737 | |
| Paelopatides56738 | |
| Paelopatides56739 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides56740 | |
| Paelopatides56741 | ARGININE OR CREATINE KINASE |
| Paelopatides56742 | |
| Paelopatides56743 | |
| Paelopatides56744 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
| Paelopatides56745 | |
| Paelopatides56746 | PHOSPHOLIPASE A2 FAMILY MEMBER |
| Paelopatides56747 |
