About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40%57,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides56491REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides56492TUBULIN
Paelopatides56493TUBULIN
Paelopatides56494MYND-TYPE DOMAIN-CONTAINING PROTEIN
Paelopatides56495
Paelopatides56496
Paelopatides56497PROTEASE S28 PRO-X CARBOXYPEPTIDASE-RELATED
Paelopatides56498STEROL DESATURASE
Paelopatides56499TENEURIN AND N-ACETYLGLUCOSAMINE-1-PHOSPHODIESTER ALPHA-N-ACETYLGLUCOSAMINIDASE
Paelopatides56500ENDONUCLEASE-RELATED
Paelopatides56501ENZYMATIC POLYPROTEIN-RELATED
Paelopatides56502
Paelopatides56503INACTIVE TYROSINE-PROTEIN KINASE 7
Paelopatides56504
Paelopatides56505TYROSINE-PROTEIN KINASE
Paelopatides56506
Paelopatides56508ATP SYNTHASE EPSILON CHAIN, MITOCHONDRIAL
Paelopatides56509TUBULIN
Paelopatides56510TUBULIN
Paelopatides56511PHD-TYPE DOMAIN-CONTAINING PROTEIN
Paelopatides56512RETROTRANSPOSON
Paelopatides56513LD44762P
Paelopatides56514
Paelopatides56515ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides56516CUBILIN-LIKE PROTEIN
Paelopatides56518OVOCHYMASE-RELATED
Paelopatides56520UNCHARACTERIZED
Paelopatides56521UNCHARACTERIZED
Paelopatides56522EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT 7
Paelopatides56523WD40 REPEAT PROTEIN
Paelopatides56524
Paelopatides565253'-5' EXORIBONUCLEASE CSL4-RELATED
Paelopatides56526REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides56527
Paelopatides56528SLIT RELATED LEUCINE-RICH REPEAT NEURONAL PROTEIN
Paelopatides56529CYSTEINE PROTEASE FAMILY C1-RELATED
Paelopatides56530
Paelopatides56531ANK_REP_REGION DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides56532
Paelopatides56533ELECTRON TRANSPORT OXIDOREDUCTASE
Paelopatides56534ELECTRON TRANSPORT OXIDOREDUCTASE
Paelopatides56536NF-KAPPA B ACTIVATING PROTEIN
Paelopatides56537PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4
Paelopatides56538DNA-DIRECTED RNA POLYMERASES I, II, AND III SUBUNIT RPABC2
Paelopatides56540GTP-BINDING
Paelopatides56541
Paelopatides56542METAL DEPENDENT HYDROLASE - RELATED
Paelopatides56543ENDONUCLEASE-RELATED
Paelopatides56544METAL DEPENDENT HYDROLASE - RELATED
Paelopatides56545METAL DEPENDENT HYDROLASE - RELATED
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