The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Paelopatides sp. Yap | Echinodermata | Paelopatides sp. Yap | Deep sea | 6,633 | Yap Trench at 8°1′22"N; 137°50′41"E | - |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
- | 3.7Gb | Contig | 2020 | - | Fujian Agriculture and Forestry University | PRJCA003789 | 89.40% | 57,522 |
Title | Journal | Pubmed ID |
---|---|---|
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environments | iScience | 36444293 |
Gene ID | Description |
---|---|
Paelopatides56851 | G PROTEIN-COUPLED RECEPTOR KINASE/RIBOSOMAL PROTEIN S6 KINASE |
Paelopatides56852 | |
Paelopatides56853 | BASIC HELIX-LOOP-HELIX PROTEIN NEUROGENIN-RELATED |
Paelopatides56854 | TESTIS DEVELOPMENT PROTEIN PRTD |
Paelopatides56855 | TESTIS DEVELOPMENT PROTEIN PRTD |
Paelopatides56856 | MORN REPEAT-CONTAINING PROTEIN 4 |
Paelopatides56857 | AN1-TYPE ZINC FINGER PROTEIN |
Paelopatides56858 | FIBRINOGEN/TENASCIN/ANGIOPOEITIN |
Paelopatides56859 | PROTEIN CBG26694 |
Paelopatides56860 | |
Paelopatides56862 | ACYL-COA DEHYDROGENASE |
Paelopatides56863 | |
Paelopatides56864 | |
Paelopatides56865 | PROTEIN CBG26694 |
Paelopatides56866 | |
Paelopatides56867 | |
Paelopatides56868 | |
Paelopatides56869 | FIBRINOGEN/TENASCIN/ANGIOPOEITIN |
Paelopatides56870 | |
Paelopatides56871 | |
Paelopatides56873 | PROTEIN CBG26694 |
Paelopatides56874 | ESSENTIAL MCU REGULATOR, MITOCHONDRIAL |
Paelopatides56875 | |
Paelopatides56876 | GTP-BINDING PROTEIN ALPHA SUBUNIT |
Paelopatides56877 | |
Paelopatides56878 | GREB1-RELATED |
Paelopatides56879 | 3'(2'),5'-BISPHOSPHATE NUCLEOTIDASE 1 |
Paelopatides56880 | 3'(2'),5'-BISPHOSPHATE NUCLEOTIDASE 1 |
Paelopatides56882 | |
Paelopatides56883 | GLUTATHIONE S-TRANSFERASE |
Paelopatides56884 | NASCENT POLYPEPTIDE ASSOCIATED COMPLEX ALPHA SUBUNIT-RELATED |
Paelopatides56885 | PROTEIN CBG26694 |
Paelopatides56886 | PROTEIN CBG26694 |
Paelopatides56887 | |
Paelopatides56888 | AMILORIDE-SENSITIVE SODIUM CHANNEL-RELATED |
Paelopatides56889 | POL PROTEIN |
Paelopatides56890 | AMILORIDE-SENSITIVE SODIUM CHANNEL-RELATED |
Paelopatides56891 | |
Paelopatides56892 | NADH-CYTOCHROME B5 REDUCTASE |
Paelopatides56893 | TESTIS-EXPRESSED PROTEIN 47 |
Paelopatides56894 | CLUSTERIN ASSOCIATED PROTEIN 1 |
Paelopatides56895 | CLUSTERIN ASSOCIATED PROTEIN 1 |
Paelopatides56896 | |
Paelopatides56897 | |
Paelopatides56898 | |
Paelopatides56899 | 3-HYDROXYACYL-COA DEHYROGENASE |
Paelopatides56900 | DED DOMAIN-CONTAINING PROTEIN |
Paelopatides56901 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Paelopatides56902 | POL PROTEIN |
Paelopatides56903 | SLIT RELATED LEUCINE-RICH REPEAT NEURONAL PROTEIN |