About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40%57,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides56904DDE_TNP_IS1595 DOMAIN-CONTAINING PROTEIN
Paelopatides56905
Paelopatides56906PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4
Paelopatides56907HAT FAMILY DIMERISATION DOMAINCONTAINING PROTEIN-RELATED
Paelopatides56908PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4
Paelopatides56909
Paelopatides56910
Paelopatides56911
Paelopatides56912
Paelopatides56913SET DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides56914TRANSPOSON
Paelopatides56915
Paelopatides56916
Paelopatides56917
Paelopatides56918PEROXISOME BIOGENESIS FACTOR 2
Paelopatides56919MSF1/PX19 RELATED
Paelopatides56920
Paelopatides56921ATP-DEPENDENT DNA HELICASE
Paelopatides56922
Paelopatides56923
Paelopatides56924EXPRESSED PROTEIN
Paelopatides56925UBIQUINONE BIOSYNTHESIS MONOOXYGENASE COQ6, MITOCHONDRIAL
Paelopatides56926UBIQUINONE BIOSYNTHESIS MONOOXYGENASE COQ6, MITOCHONDRIAL
Paelopatides56927CXC DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides56928CXC DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides56929TESMIN/TSO1-RELATED
Paelopatides56930
Paelopatides56931
Paelopatides56932
Paelopatides56933
Paelopatides56934RIBOSOMAL PROTEIN S6 KINASE
Paelopatides56935TRANSIENT RECEPTOR POTENTIAL CATION CHANNEL PROTEIN PAINLESS
Paelopatides56936TRANSIENT RECEPTOR POTENTIAL CATION CHANNEL PROTEIN PAINLESS
Paelopatides56937BOULE-RELATED
Paelopatides56938
Paelopatides56939DYNEIN HEAVY CHAIN
Paelopatides56940DYNEIN HEAVY CHAIN
Paelopatides56941
Paelopatides56942INACTIVE TYROSINE-PROTEIN KINASE 7
Paelopatides56943TYROSINE-PROTEIN KINASE
Paelopatides56944
Paelopatides56945
Paelopatides56946
Paelopatides56947
Paelopatides56948
Paelopatides56949
Paelopatides56950AUTOPHAGY-RELATED 2, ISOFORM A
Paelopatides56951NON-LTR RETROLELEMENT REVERSE TRANSCRIPTASE-LIKE PROTEIN-RELATED
Paelopatides56952NON-LTR RETROLELEMENT REVERSE TRANSCRIPTASE-LIKE PROTEIN-RELATED
Paelopatides56953GAG-RELATED PROTEIN
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