The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Paelopatides sp. Yap | Echinodermata | Paelopatides sp. Yap | Deep sea | 6,633 | Yap Trench at 8°1′22"N; 137°50′41"E | - |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
- | 3.7Gb | Contig | 2020 | - | Fujian Agriculture and Forestry University | PRJCA003789 | 89.40% | 57,522 |
Title | Journal | Pubmed ID |
---|---|---|
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environments | iScience | 36444293 |
Gene ID | Description |
---|---|
Paelopatides56904 | DDE_TNP_IS1595 DOMAIN-CONTAINING PROTEIN |
Paelopatides56905 | |
Paelopatides56906 | PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4 |
Paelopatides56907 | HAT FAMILY DIMERISATION DOMAINCONTAINING PROTEIN-RELATED |
Paelopatides56908 | PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4 |
Paelopatides56909 | |
Paelopatides56910 | |
Paelopatides56911 | |
Paelopatides56912 | |
Paelopatides56913 | SET DOMAIN-CONTAINING PROTEIN-RELATED |
Paelopatides56914 | TRANSPOSON |
Paelopatides56915 | |
Paelopatides56916 | |
Paelopatides56917 | |
Paelopatides56918 | PEROXISOME BIOGENESIS FACTOR 2 |
Paelopatides56919 | MSF1/PX19 RELATED |
Paelopatides56920 | |
Paelopatides56921 | ATP-DEPENDENT DNA HELICASE |
Paelopatides56922 | |
Paelopatides56923 | |
Paelopatides56924 | EXPRESSED PROTEIN |
Paelopatides56925 | UBIQUINONE BIOSYNTHESIS MONOOXYGENASE COQ6, MITOCHONDRIAL |
Paelopatides56926 | UBIQUINONE BIOSYNTHESIS MONOOXYGENASE COQ6, MITOCHONDRIAL |
Paelopatides56927 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
Paelopatides56928 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
Paelopatides56929 | TESMIN/TSO1-RELATED |
Paelopatides56930 | |
Paelopatides56931 | |
Paelopatides56932 | |
Paelopatides56933 | |
Paelopatides56934 | RIBOSOMAL PROTEIN S6 KINASE |
Paelopatides56935 | TRANSIENT RECEPTOR POTENTIAL CATION CHANNEL PROTEIN PAINLESS |
Paelopatides56936 | TRANSIENT RECEPTOR POTENTIAL CATION CHANNEL PROTEIN PAINLESS |
Paelopatides56937 | BOULE-RELATED |
Paelopatides56938 | |
Paelopatides56939 | DYNEIN HEAVY CHAIN |
Paelopatides56940 | DYNEIN HEAVY CHAIN |
Paelopatides56941 | |
Paelopatides56942 | INACTIVE TYROSINE-PROTEIN KINASE 7 |
Paelopatides56943 | TYROSINE-PROTEIN KINASE |
Paelopatides56944 | |
Paelopatides56945 | |
Paelopatides56946 | |
Paelopatides56947 | |
Paelopatides56948 | |
Paelopatides56949 | |
Paelopatides56950 | AUTOPHAGY-RELATED 2, ISOFORM A |
Paelopatides56951 | NON-LTR RETROLELEMENT REVERSE TRANSCRIPTASE-LIKE PROTEIN-RELATED |
Paelopatides56952 | NON-LTR RETROLELEMENT REVERSE TRANSCRIPTASE-LIKE PROTEIN-RELATED |
Paelopatides56953 | GAG-RELATED PROTEIN |