The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Paelopatides sp. Yap | Echinodermata | Paelopatides sp. Yap | Deep sea | 6,633 | Yap Trench at 8°1′22"N; 137°50′41"E | - |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| - | 3.7Gb | Contig | 2020 | - | Fujian Agriculture and Forestry University | PRJCA003789 | 89.40% | 57,522 |
| Title | Journal | Pubmed ID |
|---|---|---|
| The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environments | iScience | 36444293 |
| Gene ID | Description |
|---|---|
| Paelopatides57161 | DUF3504 DOMAIN-CONTAINING PROTEIN |
| Paelopatides57162 | TRACE AMINE-ASSOCIATED RECEPTOR 19N-RELATED |
| Paelopatides57163 | NON-LTR RETROLELEMENT REVERSE TRANSCRIPTASE-LIKE PROTEIN-RELATED |
| Paelopatides57164 | REVERSE TRANSCRIPTASES |
| Paelopatides57165 | |
| Paelopatides57166 | PROTEIN LIN-7 HOMOLOG |
| Paelopatides57167 | EF HAND DOMAIN FAMILY A1,A2-RELATED |
| Paelopatides57168 | EF HAND DOMAIN FAMILY A1,A2-RELATED |
| Paelopatides57169 | ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides57170 | |
| Paelopatides57171 | |
| Paelopatides57172 | FIBROBLAST GROWTH FACTOR |
| Paelopatides57173 | AMILORIDE-SENSITIVE SODIUM CHANNEL-RELATED |
| Paelopatides57174 | RAD50 |
| Paelopatides57175 | RAD50 |
| Paelopatides57176 | |
| Paelopatides57177 | SERINE/THREONINE-PROTEIN KINASE PLK |
| Paelopatides57178 | REPETIN |
| Paelopatides57179 | CELL DIVISION PROTEIN KINASE |
| Paelopatides57180 | DAP3-BINDING CELL DEATH ENHANCER 1 |
| Paelopatides57181 | ZINC FINGER BED DOMAIN-CONTAINING PROTEIN 4 |
| Paelopatides57182 | DAP3-BINDING CELL DEATH ENHANCER 1 |
| Paelopatides57183 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides57184 | |
| Paelopatides57185 | NEUROPEPTIDE RECEPTOR-RELATED G-PROTEIN COUPLED RECEPTOR |
| Paelopatides57186 | |
| Paelopatides57187 | PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides57188 | WD REPEAT CONTAINING PROTEIN 3 WDR3 |
| Paelopatides57189 | |
| Paelopatides57190 | |
| Paelopatides57191 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides57192 | SUSHI DOMAIN-CONTAINING PROTEIN |
| Paelopatides57193 | PROTEIN CBG26694 |
| Paelopatides57194 | AMILORIDE-SENSITIVE SODIUM CHANNEL-RELATED |
| Paelopatides57195 | 40S RIBOSOMAL PROTEIN S6 |
| Paelopatides57196 | ANKYRIN REPEAT FAMILY A |
| Paelopatides57197 | WD40 REPEAT PROTEIN 12, 37 |
| Paelopatides57198 | PROGRAMMED CELL DEATH PROTEIN 7 |
| Paelopatides57199 | ATP-DEPENDENT CLP PROTEASE ATP-BINDING SUBUNIT CLPX-LIKE, MITOCHONDRIAL-RELATED |
| Paelopatides57200 | MOLTING PROTEIN MLT-4 |
| Paelopatides57201 | SI:CH211-189E2.2 |
| Paelopatides57202 | ZINC FINGER BED DOMAIN-CONTAINING PROTEIN 4 |
| Paelopatides57203 | |
| Paelopatides57204 | |
| Paelopatides57205 | |
| Paelopatides57206 | TUBERIN |
| Paelopatides57207 | TUBERIN |
| Paelopatides57208 | TUBERIN |
| Paelopatides57209 | PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides57210 | 52 KDA REPRESSOR OF THE INHIBITOR OF THE PROTEIN KINASE-LIKE PROTEIN-RELATED |
