The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Paelopatides sp. Yap | Echinodermata | Paelopatides sp. Yap | Deep sea | 6,633 | Yap Trench at 8°1′22"N; 137°50′41"E | - |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
- | 3.7Gb | Contig | 2020 | - | Fujian Agriculture and Forestry University | PRJCA003789 | 89.40% | 57,522 |
Title | Journal | Pubmed ID |
---|---|---|
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environments | iScience | 36444293 |
Gene ID | Description |
---|---|
Paelopatides57322 | BONUS, ISOFORM C-RELATED |
Paelopatides57323 | ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN |
Paelopatides57324 | BONUS, ISOFORM C-RELATED |
Paelopatides57327 | PROTEIN, PUTATIVE-RELATED |
Paelopatides57328 | |
Paelopatides57329 | ACYL-MALONYL CONDENSING ENZYME-RELATED |
Paelopatides57330 | ACYL-MALONYL CONDENSING ENZYME-RELATED |
Paelopatides57331 | L1 TRANSPOSABLE ELEMENT-RELATED |
Paelopatides57332 | |
Paelopatides57333 | PHD-TYPE DOMAIN-CONTAINING PROTEIN |
Paelopatides57334 | PHD-TYPE DOMAIN-CONTAINING PROTEIN |
Paelopatides57335 | RETROTRANSPOSON |
Paelopatides57336 | G DOMAIN-CONTAINING PROTEIN |
Paelopatides57337 | TRANSPOSON |
Paelopatides57338 | SOLUTE CARRIER FAMILY 22 MEMBER |
Paelopatides57339 | |
Paelopatides57340 | ALPHA-L-FUCOSIDASE |
Paelopatides57341 | ALPHA-L-FUCOSIDASE |
Paelopatides57342 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Paelopatides57343 | EPM2A-INTERACTING PROTEIN 1 |
Paelopatides57344 | ANK_REP_REGION DOMAIN-CONTAINING PROTEIN-RELATED |
Paelopatides57345 | |
Paelopatides57346 | FORKHEAD BOX PROTEIN |
Paelopatides57347 | PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4 |
Paelopatides57348 | CONSERVED OLIGOMERIC GOLGI COMPLEX COMPONENT 7 |
Paelopatides57349 | RENIN RECEPTOR |
Paelopatides57350 | NACHT DOMAIN-CONTAINING PROTEIN |
Paelopatides57351 | |
Paelopatides57352 | |
Paelopatides57353 | HISTAMINE RECEPTOR-RELATED G-PROTEIN COUPLED RECEPTOR |
Paelopatides57354 | PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4 |
Paelopatides57355 | AAA-FAMILY ATPASE |
Paelopatides57356 | ELONGATION FACTOR 1-GAMMA |
Paelopatides57357 | REVERSE TRANSCRIPTASE |
Paelopatides57358 | |
Paelopatides57359 | ENDONUCLEASE-RELATED |
Paelopatides57360 | PARANEOPLASTIC ANTIGEN |
Paelopatides57361 | REVERSE TRANSCRIPTASES |
Paelopatides57362 | FIBRINOGEN/TENASCIN/ANGIOPOEITIN |
Paelopatides57363 | |
Paelopatides57364 | GUANINE NUCLEOTIDE EXCHANGE FACTOR |
Paelopatides57365 | |
Paelopatides57366 | |
Paelopatides57367 | |
Paelopatides57368 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Paelopatides57369 | PROTEIN CBG26694 |
Paelopatides57370 | LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 |
Paelopatides57371 | |
Paelopatides57372 | TYROSINE-PROTEIN KINASE RECEPTOR |
Paelopatides57373 | UNCHARACTERIZED |