About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40%57,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides57322BONUS, ISOFORM C-RELATED
Paelopatides57323ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides57324BONUS, ISOFORM C-RELATED
Paelopatides57327PROTEIN, PUTATIVE-RELATED
Paelopatides57328
Paelopatides57329ACYL-MALONYL CONDENSING ENZYME-RELATED
Paelopatides57330ACYL-MALONYL CONDENSING ENZYME-RELATED
Paelopatides57331L1 TRANSPOSABLE ELEMENT-RELATED
Paelopatides57332
Paelopatides57333PHD-TYPE DOMAIN-CONTAINING PROTEIN
Paelopatides57334PHD-TYPE DOMAIN-CONTAINING PROTEIN
Paelopatides57335RETROTRANSPOSON
Paelopatides57336G DOMAIN-CONTAINING PROTEIN
Paelopatides57337TRANSPOSON
Paelopatides57338SOLUTE CARRIER FAMILY 22 MEMBER
Paelopatides57339
Paelopatides57340ALPHA-L-FUCOSIDASE
Paelopatides57341ALPHA-L-FUCOSIDASE
Paelopatides57342REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides57343EPM2A-INTERACTING PROTEIN 1
Paelopatides57344ANK_REP_REGION DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides57345
Paelopatides57346FORKHEAD BOX PROTEIN
Paelopatides57347PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4
Paelopatides57348CONSERVED OLIGOMERIC GOLGI COMPLEX COMPONENT 7
Paelopatides57349RENIN RECEPTOR
Paelopatides57350NACHT DOMAIN-CONTAINING PROTEIN
Paelopatides57351
Paelopatides57352
Paelopatides57353HISTAMINE RECEPTOR-RELATED G-PROTEIN COUPLED RECEPTOR
Paelopatides57354PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4
Paelopatides57355AAA-FAMILY ATPASE
Paelopatides57356ELONGATION FACTOR 1-GAMMA
Paelopatides57357REVERSE TRANSCRIPTASE
Paelopatides57358
Paelopatides57359ENDONUCLEASE-RELATED
Paelopatides57360PARANEOPLASTIC ANTIGEN
Paelopatides57361REVERSE TRANSCRIPTASES
Paelopatides57362FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides57363
Paelopatides57364GUANINE NUCLEOTIDE EXCHANGE FACTOR
Paelopatides57365
Paelopatides57366
Paelopatides57367
Paelopatides57368REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides57369PROTEIN CBG26694
Paelopatides57370LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1
Paelopatides57371
Paelopatides57372TYROSINE-PROTEIN KINASE RECEPTOR
Paelopatides57373UNCHARACTERIZED
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