The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Paelopatides sp. Yap | Echinodermata | Paelopatides sp. Yap | Deep sea | 6,633 | Yap Trench at 8°1′22"N; 137°50′41"E | - |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| - | 3.7Gb | Contig | 2020 | - | Fujian Agriculture and Forestry University | PRJCA003789 | 89.40% | 57,522 |
| Title | Journal | Pubmed ID |
|---|---|---|
| The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environments | iScience | 36444293 |
| Gene ID | Description |
|---|---|
| Paelopatides57211 | PERIAXIN/AHNAK |
| Paelopatides57212 | UPF0183 PROTEIN |
| Paelopatides57213 | PROSTAGLANDIN REDUCTASE |
| Paelopatides57214 | RAS, DI-RAS, AND RHEB FAMILY MEMBERS OF SMALL GTPASE SUPERFAMILY |
| Paelopatides57215 | |
| Paelopatides57217 | CHROMOSOME TRANSMISSION FIDELITY FACTOR 18 |
| Paelopatides57218 | CHROMOSOME TRANSMISSION FIDELITY FACTOR 18 |
| Paelopatides57219 | |
| Paelopatides57220 | 60S RIBOSOMAL PROTEIN L19 |
| Paelopatides57221 | GLYCOPROTEIN HORMONE RECEPTOR |
| Paelopatides57222 | BUCENTAUR RELATED |
| Paelopatides57223 | |
| Paelopatides57224 | EXPRESSED PROTEIN |
| Paelopatides57225 | |
| Paelopatides57226 | SRCR DOMAIN-CONTAINING PROTEIN |
| Paelopatides57227 | PROPERDIN |
| Paelopatides57228 | REVERSE TRANSCRIPTASES |
| Paelopatides57229 | PROPERDIN |
| Paelopatides57230 | TRANSMEMBRANE PROTEIN C9ORF91 |
| Paelopatides57231 | VESICLE PROTEIN SORTING-ASSOCIATED |
| Paelopatides57232 | |
| Paelopatides57233 | TETRATRICOPEPTIDE REPEAT PROTEIN 22 |
| Paelopatides57234 | |
| Paelopatides57235 | |
| Paelopatides57236 | ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides57237 | PROTEIN CBG26694 |
| Paelopatides57238 | |
| Paelopatides57239 | ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides57240 | AMILORIDE-SENSITIVE SODIUM CHANNEL-RELATED |
| Paelopatides57241 | STEREOCILIN RELATED |
| Paelopatides57242 | PROTEIN CBG26694 |
| Paelopatides57243 | POL PROTEIN |
| Paelopatides57244 | RECEPTOR-TYPE TYROSINE-PROTEIN PHOSPHATASE |
| Paelopatides57245 | |
| Paelopatides57246 | |
| Paelopatides57247 | |
| Paelopatides57248 | ERLIN (ER LIPID RAFT ASSOCIATED PROTEIN) HOMOLOG |
| Paelopatides57249 | PEPTIDASE |
| Paelopatides57250 | |
| Paelopatides57251 | SERINE/THREONINE-PROTEIN KINASE KIST |
| Paelopatides57253 | |
| Paelopatides57254 | ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides57255 | KREV INTERACTION TRAPPED 1-RELATED |
| Paelopatides57256 | |
| Paelopatides57257 | |
| Paelopatides57258 | ADRENERGIC RECEPTOR-RELATED G-PROTEIN COUPLED RECEPTOR |
| Paelopatides57259 | ENDONUCLEASE-RELATED |
| Paelopatides57260 | ENDONUCLEASE-RELATED |
| Paelopatides57261 | ZINC KNUCKLE DOMAINCONTAINING PROTEIN-RELATED |
| Paelopatides57262 | ZINC KNUCKLE DOMAINCONTAINING PROTEIN-RELATED |
